Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Complete genome of a novel virulent phage ST0 lysing Escherichia coli H8.

ABSTRACT: Phage ST0 lysing Escherichia coli H8 was isolated from wastewater and sequenced using an Illumina HiSeq system. Genomic analyses revealed that it was virulent phages and contained a circular double-stranded DNA genome, consisting of 170,496 nucleotides with an average G?+?C content of 37.67%. This study may provide possible alternative materials for phage therapy.

SUBMITTER: Liu H

PROVIDER: S-EPMC5738172 | biostudies-literature | 2017

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Complete genome of a novel virulent phage ST0 lysing Escherichia coli H8.

Liu Honghui H Liu Xinchun X Li Jinqing J

Standards in genomic sciences 20171219

Phage ST0 lysing Escherichia coli H8 was isolated from wastewater and sequenced using an Illumina HiSeq system. Genomic analyses revealed that it was virulent phages and contained a circular double-stranded DNA genome, consisting of 170,496 nucleotides with an average G + C content of 37.67%. This study may provide possible alternative materials for phage therapy. ...[more]

PMID: 29276570

Similar Datasets

Complete genome sequence of the novel Escherichia coli phage phAPEC8.

Project description:Bacteriophage phAPEC8 is an Escherichia coli-infecting myovirus, isolated on an avian pathogenic Escherichia coli (APEC) strain. APEC strains cause colibacillosis in poultry, resulting in high mortality levels and important economic losses. Genomic analysis of the 147,737-bp double-stranded DNA phAPEC8 genome revealed that 53% of the 269 encoded proteins are unique to this phage. Its closest relatives include the Salmonella phage PVP-SE1 and the coliphage rv5, with 19% and 18% similar proteins, respectively. As such, phAPEC8 represents a novel, phylogenetically distinct clade within the Myoviridae, with molecular properties suitable for phage therapy applications.

| S-EPMC3497662 | biostudies-literature

Complete Genome Sequence of Bacteriophage EC6, Capable of Lysing Escherichia coli O157:H7.

Project description:A bacteriophage, EC6, capable of lysing Escherichia coli serotype O157:H7 was isolated and found to be a member of the family Myoviridae. The genomic sequence of phage EC6 was composed of 86,231 bp with a G+C content of 38.9% and is very similar to the sequences of Escherichia phage wV8 and Salmonella phage Felix O1.

| S-EPMC3569278 | biostudies-literature

Complete Genome Sequence of Escherichia coli Phage Pisces.

Project description:Podophage Pisces was isolated against Escherichia coli strain 4s from wastewater samples. Pisces is a T7-like phage, and all 49 predicted protein-coding genes in it are present on a single strand and are surrounded by 190-bp terminal repeats. Due to its similarity to other T7-like phages, 61% of Pisces genes were assigned a predicted function.

| S-EPMC6763662 | biostudies-literature

Complete Genome Sequence of Escherichia coli Phage vB_EcoM_Alf5.

Project description:Here, we announce the complete genome sequence of the Escherichia coli myophage vB_EcoM_Alf5 belonging to the genus Felixo1virus, whose members have not been comprehensively studied at the molecular level. Phage vB_EcoM_Alf5 infects E. coli K-12-derived laboratory strains and therefore is well suited for functional studies.

| S-EPMC5477317 | biostudies-literature

Complete Genome Sequence of Escherichia coli Phage Paul.

Project description:Escherichia coli is both a commensal and a pathogen in humans and other animals. Here, we describe the isolation of E. coli strain 4s bacteriophage Paul. The complete 79,429-bp genome was annotated and demonstrates similarity with phieco32viruses, as does its prolate podophage morphology.

| S-EPMC6787329 | biostudies-literature

Complete Genome Sequence of the Escherichia coli Phage Ayreon.

Project description:We report the whole-genome sequence of a new Escherichia coli temperate phage, Ayreon, comprising a linear double-stranded DNA (dsDNA) genome of 44,708 bp.

| S-EPMC5764929 | biostudies-literature

Complete Genome Sequences of Four Novel Escherichia coli Bacteriophages Belonging to New Phage Groups.

Project description:Here, we describe the sequencing and genome annotations of a set of four Escherichia coli bacteriophages (phages) belonging to newly discovered groups previously consisting of only a single phage and thus expand our knowledge of these phage groups.

| S-EPMC4505120 | biostudies-literature

Complete Genome Sequence of Escherichia coli O157:H7 Phage PhiG17.

Project description:Here, we announce the complete genome sequence of bacteriophage PhiG17, which is virulent to Escherichia coli O157:H7 strains and was isolated from cattle feces in the North West province of South Africa. This report presents the major genetic features of the phage PhiG17 based on its whole-genome sequence.

| S-EPMC6346152 | biostudies-literature

Complete Genome Sequences of Three Shiga Toxin-Producing Escherichia coli O111:H8 Strains Exhibiting an Aggregation Phenotype.

Project description:Non-O157 Shiga toxin-producing Escherichia coli (STEC) strains are a common source of foodborne illness. STEC O111 is among the most prevalent non-O157 STEC serogroups. Few completed genomes of STEC O111 strains have been reported to date. We report here the complete genomic sequences of three O111:H8 strains that display a distinct aggregation phenotype.

| S-EPMC6318357 | biostudies-literature

Complete genome sequence of Pseudomonas phage Ep4 lysing the kiwifruit canker bacteria.

Project description:Pseudomonas syringae pv. actinidiae is a pathogen of kiwifruit canker. Ep4, a bacteriophage lysing the pathogenic bacteria, was isolated from an affected plant. Sequencing and annotation have revealed 44,614-bp genome with 52 predicted open reading frames. Ep4 is closest to Pseudomonas phage YMC11/06/C171_PPU_BP, albeit with low homology.

| S-EPMC10793322 | biostudies-literature