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Cryptic glucocorticoid receptor-binding sites pervade genomic NF-?B response elements.


ABSTRACT: Glucocorticoids (GCs) are potent repressors of NF-?B activity, making them a preferred choice for treatment of inflammation-driven conditions. Despite the widespread use of GCs in the clinic, current models are inadequate to explain the role of the glucocorticoid receptor (GR) within this critical signaling pathway. GR binding directly to NF-?B itself-tethering in a DNA binding-independent manner-represents the standing model of how GCs inhibit NF-?B-driven transcription. We demonstrate that direct binding of GR to genomic NF-?B response elements (?BREs) mediates GR-driven repression of inflammatory gene expression. We report five crystal structures and solution NMR data of GR DBD-?BRE complexes, which reveal that GR recognizes a cryptic response element between the binding footprints of NF-?B subunits within ?BREs. These cryptic sequences exhibit high sequence and functional conservation, suggesting that GR binding to ?BREs is an evolutionarily conserved mechanism of controlling the inflammatory response.

SUBMITTER: Hudson WH 

PROVIDER: S-EPMC5889392 | biostudies-literature | 2018 Apr

REPOSITORIES: biostudies-literature

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Cryptic glucocorticoid receptor-binding sites pervade genomic NF-κB response elements.

Hudson William H WH   Vera Ian Mitchelle S de IMS   Nwachukwu Jerome C JC   Weikum Emily R ER   Herbst Austin G AG   Yang Qin Q   Bain David L DL   Nettles Kendall W KW   Kojetin Douglas J DJ   Ortlund Eric A EA  

Nature communications 20180406 1


Glucocorticoids (GCs) are potent repressors of NF-κB activity, making them a preferred choice for treatment of inflammation-driven conditions. Despite the widespread use of GCs in the clinic, current models are inadequate to explain the role of the glucocorticoid receptor (GR) within this critical signaling pathway. GR binding directly to NF-κB itself-tethering in a DNA binding-independent manner-represents the standing model of how GCs inhibit NF-κB-driven transcription. We demonstrate that dir  ...[more]

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