Ontology highlight
ABSTRACT:
SUBMITTER: Li T
PROVIDER: S-EPMC5926533 | biostudies-literature | 2018 Apr
REPOSITORIES: biostudies-literature
Li Tingting T Jia Lumeng L Cao Yong Y Chen Qing Q Li Cheng C
Genome biology 20180424 1
We develop a method called open chromatin enrichment and network Hi-C (OCEAN-C) for antibody-independent mapping of global open chromatin interactions. By integrating FAIRE-seq and Hi-C, OCEAN-C detects open chromatin interactions enriched by active cis-regulatory elements. We identify more than 10,000 hubs of open chromatin interactions (HOCIs) in human cells, which are mainly active promoters and enhancers bound by many DNA-binding proteins and form interaction networks crucial for gene transc ...[more]