Dataset Information

A reassessment of the genome size-invasiveness relationship in reed canarygrass (Phalaris arundinacea).

ABSTRACT: Background and Aims:Genome size is hypothesized to affect invasiveness in plants. Key evidence comes from a previous study of invasive eastern North American populations of the grass Phalaris arundinacea: invasive genotypes with smaller genomes had higher growth rates, and genome sizes were smaller in the invasive vs. native range. This study aimed to re-investigate those patterns by examining a broader range of North American populations and by employing the modern best-practice protocol for plant genome size estimation in addition to the previously used protocol. Methods:Genome sizes were measured using both internal and pseudo-internal standardization protocols for 20 invasive and nine native range accessions of P. arundinacea. After a round of vegetative propagation to reduce maternal environmental effects, growth (stem elongation) rates of these accessions were measured in the greenhouse. Key Results:Using the best-practice protocol, there was no evidence of a correlation between genome size and growth rates (P = 0.704), and no evidence for differences in genome sizes of invasive and native range accessions (P > 0.353). However, using the older genome size estimation protocol, both relationships were significant (reproducing the results of the previous study). Conclusions:Genome size reduction has not driven increased invasiveness in a broad sample of North American P. arundinacea. Further, inappropriate genome size estimation techniques can create spurious correlations between genome size and plant traits such as growth rate. Valid estimation is vital to progress in understanding the potentially widespread effects of genome size on biological processes and patterns.

SUBMITTER: Martinez MA

PROVIDER: S-EPMC6007324 | biostudies-literature | 2018 Jun

REPOSITORIES: biostudies-literature

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A reassessment of the genome size-invasiveness relationship in reed canarygrass (Phalaris arundinacea).

Martinez Megan A MA Baack Eric J EJ Hovick Stephen M SM Whitney Kenneth D KD

Annals of botany 20180601 7

<h4>Background and aims</h4>Genome size is hypothesized to affect invasiveness in plants. Key evidence comes from a previous study of invasive eastern North American populations of the grass Phalaris arundinacea: invasive genotypes with smaller genomes had higher growth rates, and genome sizes were smaller in the invasive vs. native range. This study aimed to re-investigate those patterns by examining a broader range of North American populations and by employing the modern best-practice protoco ...[more]

PMID: 29534147

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Project description:A four-year research study was conducted on aquatic plants (reed canary grass) growing in the beds of three rivers and their tributaries in Lower Silesia, Poland. Metal contents (Cu, Cd, Ni, Pb, Zn, Fe, Mn) were determined in plant samples, metal accumulation in water (BCFw) and sediment (BCFB), Metal Pollution Index (MPI) and Enrichment Factor (EF) were calculated. The highest contents of copper, lead, nickel and cadmium were found in reed canary grass sampled from the Nysa Szalona River. The highest values were recorded for zinc in the Bystrzyca River, and for iron and manganese in the Strzegomka River. The series of metals were as follows: Nysa Szalona and Strzegomka: Cd < Ni < Pb < Cu < Zn < Mn < Fe, Bystrzyca: Cd < Ni < Cu < Pb < Zn < Mn < Fe. Throughout the study period, the lowest values of metals in plants were recorded in 2015 and 2018, and the highest in 2017. The general picture of MPI in aquatic plants is arranged in the series Bystrzyca < Strzegomka < Nysa Szalona. These values classify the studied material at a high level of pollution in all rivers. In the comparison of the two extreme sites, i.e., source-mouth, higher values were found at the mouth of the reservoir, which suggests that metals move with the water current and accumulate more with the direction of the river flow, which is most likely a consequence of the influence of the catchment area as the source of metals. The series of EF enrichment factor values were as follows: Bystrzyca-Ni < Cd < Fe < Cu < Zn < Mn < Pb, Nysa Szalona-Ni < Fe < Zn < Cd < Mn < Cu < Pb, Strzegomka-Ni < Cd < Fe < Zn < Cu < Pb < Mn. For all the samples studied, the values found in spring were much higher than in autumn, which indicates the great importance for research in that area. The levels of copper and iron were within the range of moderate values, lead and manganese reached very high and exceptionally high values, and the remaining metals were within the values described as significant. Bioaccumulation of metals determined relative to bottom sediments was highest in 2017 and lowest in 2018, while bioaccumulation relative to water was highest in 2018 and lowest in 2016. The four-year study found that the metal content in reed canary grass was mostly within the range of mean values presented in the literature from moderately polluted areas. Also, no significant deviation was found from levels that have been recorded for the same rivers for more than two decades.

Project description:Diclofenac (DCF), a non-steroidal anti-inflammatory drug (NSAID) and sulfamethoxazole (SMX), an antimicrobial agent, are in common use and can be often detected in the environment. The constructed wetland systems (CWs) are one of the technologies to remove them from the aquatic environment. The final effect of the treatment processes depends on many factors, including the interaction between plants and the plant-associated microorganisms present in the system. Bacteria living inside the plant as endophytes are exposed to secondary metabolites in the tissues. Therefore, they can possess the potential to degrade aromatic structures, including residues of pharmaceuticals. The endophytic strain MG7 identified as Microbacterium sp., obtained from root tissues of Phalaris arundinacea exposed to DCF and SMX was tested for the ability to remove 2 mg/l of SMX and DCF in monosubstrate cultures and in the presence of phenol as an additional carbon source. The MG7 strain was able to remove approximately 15% of DCF and 9% of SMX after 20 days of monosubstrate culture. However, a decrease in the optical density of the MG7 strain cultures was observed, caused by an insufficient carbon source for bacterial growth and proliferation. The adsorption of pharmaceuticals onto autoclaved cells was negligible, which confirmed that the tested strain was directly involved in the removal of DCF and SMX. In the presence of phenol as the additional carbon source, the MG7 strain was able to remove approximately 35% of DCF and 61% of SMX, while an increase in the optical density of the cultures was noted. The higher removal efficiency can be explained by adaptive mechanisms in microorganisms exposed to phenol (i.e. changes in the composition of membrane lipids) and by a co-metabolic mechanism, where non-growth substrates can be transformed by non-specific enzymes. The presence of both DCF and SMX and the influence of the supply frequency of CWs with the contaminated wastewater on the diversity of whole endophytic bacterial communities were demonstrated. The results of this study suggest the capability of the MG7 strain to degrade DCF and SMX. This finding deserves further investigations to improve wastewater treatment in CWs with the possible use of pharmaceuticals-degrading endophytes.

Dataset Information

A reassessment of the genome size-invasiveness relationship in reed canarygrass (Phalaris arundinacea).

Publications

A reassessment of the genome size-invasiveness relationship in reed canarygrass (Phalaris arundinacea).

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