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Comparative Ascaroside Profiling of Caenorhabditis Exometabolomes Reveals Species-Specific (?) and (? - 2)-Hydroxylation Downstream of Peroxisomal ?-Oxidation.


ABSTRACT: Chemical communication in nematodes such as the model organism Caenorhabditis elegans is modulated by a variety of glycosides based on the dideoxysugar l-ascarylose. Comparative ascaroside profiling of nematode exometabolome extracts using a GC-EIMS screen reveals that several basic components including ascr#1 (asc-C7), ascr#2 (asc-C6-MK), ascr#3 (asc-?C9), ascr#5 (asc-?C3), and ascr#10 (asc-C9) are highly conserved among the Caenorhabditis. Three novel side chain hydroxylated ascaroside derivatives were exclusively detected in the distantly related C. nigoni and C. afra. Molecular structures of these species-specific putative signaling molecules were elucidated by NMR spectroscopy and confirmed by total synthesis and chemical correlations. Biological activities were evaluated using attraction assays. The identification of (?)- and (? - 2)-hydroxyacyl ascarosides demonstrates how GC-EIMS-based ascaroside profiling facilitates the detection of novel ascaroside components and exemplifies how species-specific hydroxylation of ascaroside aglycones downstream of peroxisomal ?-oxidation increases the structural diversity of this highly conserved class of nematode signaling molecules.

SUBMITTER: Dong C 

PROVIDER: S-EPMC6035057 | biostudies-literature | 2018 Jul

REPOSITORIES: biostudies-literature

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Comparative Ascaroside Profiling of Caenorhabditis Exometabolomes Reveals Species-Specific (ω) and (ω - 2)-Hydroxylation Downstream of Peroxisomal β-Oxidation.

Dong Chuanfu C   Reilly Douglas K DK   Bergame Célia C   Dolke Franziska F   Srinivasan Jagan J   von Reuss Stephan H SH  

The Journal of organic chemistry 20180305 13


Chemical communication in nematodes such as the model organism Caenorhabditis elegans is modulated by a variety of glycosides based on the dideoxysugar l-ascarylose. Comparative ascaroside profiling of nematode exometabolome extracts using a GC-EIMS screen reveals that several basic components including ascr#1 (asc-C7), ascr#2 (asc-C6-MK), ascr#3 (asc-ΔC9), ascr#5 (asc-ωC3), and ascr#10 (asc-C9) are highly conserved among the Caenorhabditis. Three novel side chain hydroxylated ascaroside derivat  ...[more]

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