Dataset Information

Cross-species screening of microsatellite markers for individual identification of snow petrel Pagodroma nivea and Wilson's storm petrel Oceanites oceanicus in Antarctica.

ABSTRACT: Seabirds are important indicators of marine ecosystem health. Species within the order Procellariiformes are the most abundant seabird species group distributed from warm tropical to cold temperate regions including Antarctica. There is a paucity of information on basic biology of the pelagic seabird species nesting on the Antarctic continents, and long-term studies are required to gather data on their population demography, genetics and other ecological parameters. Under the 'Biology and Environmental Sciences' component of the Indian Antarctic programme, long-term monitoring of Antarctic biodiversity is being conducted. In this paper, we describe results of cross-species screening of a panel of 12 and 10 microsatellite markers in two relatively little studied seabird species in Antarctica, the snow petrel Pagodroma nivea and the Wilson's storm petrel Oceanites oceanicus, respectively. These loci showed high amplification success and moderate levels of polymorphism in snow petrel (mean no. of alleles 7.08 ± 3.01 and mean observed heterozygosity 0.35 ± 0.23), but low polymorphism in Wilson's storm petrel (mean no. of alleles 3.9 ± 1.3 and mean observed heterozygosity 0.28 ± 0.18). The results demonstrate that these panels can unambiguously identify individuals of both species (cumulative PIDsibs for snow petrel is 3.7 × 10-03 and Wilson's storm petrel is 1.9 × 10-02) from field-collected samples. This work forms a baseline for undertaking long-term genetic research of these Antarctic seabird species and provides critical insights into their population genetics.

SUBMITTER: Pande A

PROVIDER: S-EPMC6055593 | biostudies-literature | 2018

REPOSITORIES: biostudies-literature

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Publications

Cross-species screening of microsatellite markers for individual identification of snow petrel <i>Pagodroma nivea</i> and Wilson's storm petrel <i>Oceanites oceanicus</i> in Antarctica.

Pande Anant A Rawat Nidhi N Sivakumar Kuppusamy K Sathyakumar Sambandam S Mathur Vinod B VB Mondol Samrat S

PeerJ 20180720

Seabirds are important indicators of marine ecosystem health. Species within the order Procellariiformes are the most abundant seabird species group distributed from warm tropical to cold temperate regions including Antarctica. There is a paucity of information on basic biology of the pelagic seabird species nesting on the Antarctic continents, and long-term studies are required to gather data on their population demography, genetics and other ecological parameters. Under the 'Biology and Enviro ...[more]

PMID: 30042893

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Project description:The importance of nest characteristics for birds breeding in the extreme climate conditions of polar regions, has been greatly understudied. Nest parameters, like nest orientation, exposure and insulation, could strongly influence microclimate and protection against precipitation of the nest, thereby affecting breeding success. A burrow nesting seabird, the Wilson's storm-petrel (Oceanites oceanicus) is an excellent model species to investigate the importance of nest characteristics, as it is the smallest endotherm breeding in the Antarctic. Here, we investigated the effects of nest parameters such as internal nest dimensions, nest micro-topography and thermal properties of the nest burrow and the influence of weather conditions on breeding output, measured as hatching success, chick survival, and chick growth. We collected data during the austral summers of 2017 and 2018, on King George Island, maritime Antarctica. Our results showed that the thermal microclimate of the nest burrow was significantly improved by a small entrance size, a low nest height, and insulation and tended to be enhanced by a low wind exposition index and an eastern nest site orientation. In addition, an eastern nest site orientation significantly reduced the chance of snow blocking. However, the relationships between nest characteristics and breeding output were complex and might be affected by other parameters like food availability and parental quality. The relation between chick growth and nest air temperature remained especially indistinct. Nevertheless, our results indicate that nest characteristics that enhance the thermal microclimate and reduce the risk of snow blocking favoured both hatching success and chick survival. Due to climate change in the Antarctic, snowfall is expected to increase in the future, which will likely enhance the importance of nest characteristics that determine snow blocking. Additionally, despite global warming, thermally favourable nest burrows will likely still be advantageous in the highly variable and challenging Antarctic climate.

Project description:Seabirds are integral components of marine ecosystems and, with many populations globally threatened, there is a critical need for effective and scalable seabird monitoring strategies. Many seabird species nest in burrows, which can make traditional monitoring methods costly, infeasible, or damaging to nesting habitats. Traditional burrow occupancy surveys, where possible, can occur infrequently and therefore lead to an incomplete understanding of population trends. For example, in Oregon, during the last three decades there have been large changes in the abundance of Leach's storm-petrels (Hydrobates leucorhoa), which included drastic declines at some colonies. Unfortunately, traditional monitoring failed to capture the timing and magnitude of change, limiting managers' ability to determine causes of the decline and curtailing management options. New, easily repeatable methods of quantifying relative abundance are needed. For this study, we tested three methods of remote monitoring: passive acoustic monitoring, time-lapse cameras, and radar. Abundance indices derived from acoustics and imagery: call rates, acoustic energy, and counts were significantly related to traditional estimates of burrow occupancy of Leach's storm-petrels. Due to sampling limitations, we were unable to compare radar to burrow occupancy. Image counts were significantly correlated with all other indices, including radar, while indices derived from acoustics and radar were not correlated. Acoustic data likely reflect different aspects of the population and hold the potential for the further development of indices to disentangle phenology, attendance of breeding birds, and reproductive success. We found that image counts are comparable with standard methods (e.g., radar) in producing annual abundance indices. We recommend that managers consider a sampling scheme that incorporates both acoustics and imaging, but for sites inaccessible to humans, radar remains the sole option. Implementation of acoustic and camera based monitoring programs will provide much needed information for a vulnerable group of seabirds.

Dataset Information

Cross-species screening of microsatellite markers for individual identification of snow petrel Pagodroma nivea and Wilson's storm petrel Oceanites oceanicus in Antarctica.

Publications

Cross-species screening of microsatellite markers for individual identification of snow petrel <i>Pagodroma nivea</i> and Wilson's storm petrel <i>Oceanites oceanicus</i> in Antarctica.

Similar Datasets

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