Ontology highlight
ABSTRACT:
SUBMITTER: Wei Z
PROVIDER: S-EPMC6061683 | biostudies-literature | 2018 Aug
REPOSITORIES: biostudies-literature
Wei Zheng Z Zhang Wei W Fang Huan H Li Yanda Y Wang Xiaowo X
Bioinformatics (Oxford, England) 20180801 15
<h4>Summary</h4>ATAC-seq is rapidly emerging as one of the major experimental approaches to probe chromatin accessibility genome-wide. Here, we present 'esATAC', a highly integrated easy-to-use R/Bioconductor package, for systematic ATAC-seq data analysis. It covers essential steps for full analyzing procedure, including raw data processing, quality control and downstream statistical analysis such as peak calling, enrichment analysis and transcription factor footprinting. esATAC supports one com ...[more]