Browse
Submit Data
Databases
API
Help

Dataset Information

22 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Draft Genome Sequence of Enterobacter cloacae 3D9 (Phylum Proteobacteria).

ABSTRACT: Presented here is the draft genome sequence of Enterobacter cloacae 3D9. This candidate seed endophyte was isolated from Zea nicaraguensis. The genome contains 4,653,375?bp in 28 contigs.

SUBMITTER: Dumigan CR

PROVIDER: S-EPMC6256583 | biostudies-literature | 2018 Oct

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Draft Genome Sequence of Enterobacter cloacae 3D9 (Phylum Proteobacteria).

Dumigan Christopher R CR Perry Gregory E GE Pauls K Peter KP Raizada Manish N MN

Microbiology resource announcements 20181025 16

Presented here is the draft genome sequence of Enterobacter cloacae 3D9. This candidate seed endophyte was isolated from Zea nicaraguensis. The genome contains 4,653,375 bp in 28 contigs. ...[more]

PMID: 30533747

Similar Datasets

Draft Genome Sequence of Enterobacter cloacae 3F11 (Phylum Proteobacteria).

Project description:Presented here is the draft genome sequence of Enterobacter cloacae 3F11. This seed endophyte solubilizes rock phosphate and was isolated from Zea nicaraguensis. The genome contains 4,579,108?bp in 264 contigs.

| S-EPMC6256469 | biostudies-literature

Draft Genome Sequence of Enterobacter sp. Strain UCD-UG_FMILLET (Phylum Proteobacteria).

Project description:Here, we present the draft genome of Enterobacter sp. strain UCD-UG_FMILLET. This strain is an endophyte isolated from the roots of finger millet, an Afro-Indian cereal crop. The genome contains 4,801,411 bp in 53 scaffolds.

| S-EPMC4319590 | biostudies-literature

Draft Genome Sequence of Enterobacter cloacae Strain S611.

Project description:We report draft genomes of Enterobacter cloacae strain S611, an endophytic bacterium isolated from surface-sterilized germinating wheat seeds. We present the assembly and annotation of its genome, which may provide insights into the metabolic pathways involved in adaptation.

| S-EPMC4263822 | biostudies-literature

Draft Genome Sequence of Burkholderia gladioli Strain UCD-UG_CHAPALOTE (Phylum Proteobacteria).

Project description:Here, we present the draft genome of Burkholderia gladioli strain UCD-UG_CHAPALOTE. This strain is an endophyte isolated from surface sterilized seeds of an ancient Mexican landrace of corn, Chapalote. The genome contains 8,527,129 bp in 109 scaffolds.

| S-EPMC4319580 | biostudies-literature

Draft Genome Sequence of Tatumella sp. Strain UCD-D_suzukii (Phylum Proteobacteria) Isolated from Drosophila suzukii Larvae.

Project description:Here we present the draft genome of Tatumella sp. strain UCD-D_suzukii, the first member of this genus to be sequenced. The genome contains 3,602,931 bp in 72 scaffolds. This strain was isolated from Drosophila suzukii larvae as part of a larger project to study the microbiota of D. suzukii.

| S-EPMC3999497 | biostudies-literature

Draft Genome Sequence of a High-Level Colistin-Resistant Clinical Strain of the Enterobacter cloacae Complex.

Project description:Strain WCHECl-C4 of the Enterobacter cloacae complex, recovered from the blood of a patient with peritonitis, was high-level resistant to colistin. Here, we report its 5.1-Mb draft genome sequence, comprising 92 contigs with an average 55.74% G+C content. The genome contained 4,783 coding sequences and 68 tRNA genes.

| S-EPMC5383897 | biostudies-literature

Complete genome sequence of Enterobacter cloacae subsp. cloacae type strain ATCC 13047.

Project description:Enterobacter cloacae is an important nosocomial pathogen. Here, we report the completion of the genome sequence of E. cloacae ATCC 13047, the type strain of E. cloacae subsp. cloacae. Multiple sets of virulence determinant and heavy-metal resistance genes have been found in the genome. To the best of our knowledge, this is the first complete genome sequence of the E. cloacae species.

| S-EPMC2863489 | biostudies-literature

Complete genome sequence of the endophytic Enterobacter cloacae subsp. cloacae strain ENHKU01.

Project description:Enterobacter cloacae subsp. cloacae strain ENHKU01 is a Gram-negative endophyte isolated from a diseased pepper (Capsicum annuum) plant in Hong Kong. This is the first complete genome sequence report of a plant-endophytic strain of E. cloacae subsp. cloacae.

| S-EPMC3486125 | biostudies-literature

Draft Genome Sequences of Acinetobacter sp. Strain EKM10A, Enterobacter hormaechei EKM10E, and Enterobacter hormaechei EKM11E (Phylum Proteobacteria) Colonizing the Seed Surface Biogel of Echinocystis lobata (Wild Cucumber).

Project description:Here, we report the draft genome sequences of Acinetobacter sp. strain EKM10A, Enterobacter hormaechei EKM10E, and Enterobacter hormaechei EKM11E, containing 3,978,352, 4,760,222, and 4,758,163 bp, respectively. These seed biogel-associated endophytes were previously isolated from the seed wash of Echinocystis lobata (wild cucumber) and tested in vitro for antagonism against soilborne fungal/oomycete pathogens.

| S-EPMC7225530 | biostudies-literature

Draft genome sequence data of a tigecycline-resistant Enterobacter cloacae ST93 clinical strain isolated from bloodstream infection.

Project description:Here we report data on the draft genome sequence of a tigecycline-resistant Enterobacter cloacae ST93 clinical isolate TREC1 producing KPC-2 carbapenemase from China. The draft genome sequence of E. cloacae TREC1 consisted of 74 contigs that comprised 5,322,835?bp, and the overall GC content of this strain amounted to 54.63%. In total, 57 tRNA genes, 5 rRNA operons and 5108 protein-coding sequences were identified in the genome. TREC1 belongs to sequence type ST93. Nineteen antimicrobial resistance genes were confirmed. Antimicrobial susceptibility testing revealed that besides colistin this isolate is resistant to all antibiotics including tigecycline. This Whole Genome Shotgun project has been deposited at DDBJ/EMBL/GenBank under the accession number PJZE00000000. (http://www.ncbi.nlm.nih.gov/nuccore/PJZE00000000).

| S-EPMC6198125 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data