Browse
Submit Data
Databases
API
Help

Dataset Information

33 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Draft Genome Sequence of Phaeobacter sp. Strain JL2872, Isolated from Surface Waters in the South China Sea.

ABSTRACT: Phaeobacter sp. strain JL2872 was isolated from surface waters in the South China Sea. We report here the draft genome sequence of strain JL2872, which can contribute to our understanding of the characteristics of the members of the genus Phaeobacter.

SUBMITTER: Cui R

PROVIDER: S-EPMC6256635 | biostudies-literature | 2018 Oct

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Draft Genome Sequence of Phaeobacter sp. Strain JL2872, Isolated from Surface Waters in the South China Sea.

Cui Rong R Tian Yu Y Shao Zhisheng Z Lin Xiaopei X

Microbiology resource announcements 20181011 14

Phaeobacter sp. strain JL2872 was isolated from surface waters in the South China Sea. We report here the draft genome sequence of strain JL2872, which can contribute to our understanding of the characteristics of the members of the genus Phaeobacter. ...[more]

PMID: 30533704

Similar Datasets

Complete Genome Sequence of the d-Amino Acid Catabolism Bacterium Phaeobacter sp. Strain JL2886, Isolated from Deep Seawater of the South China Sea.

Project description:Phaeobacter sp. strain JL2886, isolated from deep seawater of the South China Sea, can catabolize d-amino acids. Here, we report the complete genome sequence of Phaeobacter sp. JL2886. It comprises ~4.06 Mbp, with a G+C content of 61.52%. A total of 3,913 protein-coding genes and 10 genes related to d-amino acid catabolism were obtained.

| S-EPMC5009982 | biostudies-literature

Draft Genome Sequence of Pseudoalteromonas sp. Strain ECSMB14103, Isolated from the East China Sea.

Project description:Pseudoalteromonas sp. strain ECSMB14103 was isolated from marine biofilms formed on the East China Sea. The draft genome sequence comprises 4.11 Mp with a G+C content of 39.7%. The information from the draft genome will contribute to an understanding of bacteria-animal interaction.

| S-EPMC4408339 | biostudies-literature

Draft genome sequence of marine-derived Streptomyces sp. strain AA0539, isolated from the Yellow Sea, China.

Project description:Here, we report the draft genome sequence of Streptomyces sp. strain AA0539, isolated from marine sediment of the Yellow Sea, China. Its small genome (∼5.8 Mb) contains large, unique genes and gene clusters for diverse secondary metabolites, suggesting great potential as a source for the discovery of novel natural products.

| S-EPMC3497518 | biostudies-literature

Draft Genome Sequence of Urease-Producing Pseudorhodobacter sp. Strain E13, Isolated from the Yellow Sea in Gunsan, South Korea.

Project description:Here, we report the draft genome sequence of Pseudorhodobacter sp. strain E13, a Gram-negative, aerobic, nonflagellated, and rod-shaped bacterium which was isolated from the Yellow Sea in South Korea. The assembled genome sequence is 3,878,578?bp long with 3,646 protein-coding sequences in 159 contigs.

| S-EPMC6554599 | biostudies-literature

Draft Genome Sequence of Ristocetin-Producing Strain Amycolatopsis sp. Strain MJM2582 Isolated in South Korea.

Project description:The draft genome sequence of a ristocetin-producing Amycolatopsis strain (sp. MJM2582) isolated in South Korea is reported here. This strain has a genome of approximately 8.9 Mb containing 7,933 predicted genes, including the ristocetin cluster and 32 additional predicted secondary metabolite biosynthesis clusters.

| S-EPMC4214986 | biostudies-literature

Draft Genome Sequence of Shewanella sp. ECSMB14101, Isolated from the East China Sea.

Project description:Shewanella sp. ECSMB14101 was isolated from marine biofilms formed on the East China Sea. The draft genome sequence comprises 4,272,451 bp with a G+C content of 49.82%. Information on this draft genome will contribute to the understanding of bacterium-animal interactions.

| S-EPMC4299893 | biostudies-literature

Draft Genome Sequence of Idiomarina sp. Strain W-5T, Isolated from the Andaman Sea.

Project description:Here, we report the draft genome sequence of Idiomarina sp. strain W-5T, which was isolated from the Andaman Sea. The genome encodes 2,207 proteins. The Idiomarina sp. strain W-5T whole-genome sequence will help us to understand the metabolic diversity in marine bacteria.

| S-EPMC6992873 | biostudies-literature

Draft Genome Sequence of Pelagicola sp. Strain LXJ1103, Isolated from Coastal Surface Seawater.

Project description:Pelagicola sp. strain LXJ1103, a representative of a new species in the family Rhodobacteraceae, was isolated from the coastal surface waters in Xiamen, China. Here, we announce the draft genome sequence and initial findings from a preliminary analysis of strain LXJ1103.

| S-EPMC6256632 | biostudies-literature

Draft Genome Sequence of Paracoccus sp. Strain 228, Isolated from Surface Water of the Gulf of Gdansk in the Baltic Sea.

Project description:We present here the draft genome sequence of Paracoccus sp. strain 228, isolated from the Gulf of Gdańsk in the southern part of the Baltic Sea. The assembly contains 4,131,609 bp in 32 scaffolds.

| S-EPMC6639606 | biostudies-literature

Genome sequence of Citromicrobium strain JLT1363, isolated from the South China Sea.

Project description:Citromicrobium is a member of the alpha-4 subcluster in the Alphaproteobacteria and is identified as a typical aerobic anoxygenic phototrophic bacterium (AAPB). Here we report the draft genome sequence of a non-AAPB strain, Citromicrobium sp. JLT1363. The genome sequence reveals a multimechanism of horizontal gene transfer, as well.

| S-EPMC3133042 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data