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Transfer hydrogenation in open-shell nucleotides - a theoretical survey.

ABSTRACT: The potential of a larger number of sugar models to act as dihydrogen donors in transfer hydrogenation reactions has been quantified through the calculation of hydrogenation energies of the respective oxidized products. Comparison of the calculated energies to hydrogenation energies of nucleobases shows that many sugar fragment radicals can reduce pyrimidine bases such as uracil in a strongly exothermic fashion. The most potent reducing agent is the C3' ribosyl radical. The energetics of intramolecular transfer hydrogenation processes has also been calculated for a number of uridinyl radicals. The largest driving force for such a process is found for the uridin-C3'-yl radical, whose rearrangement to the C2'-oxidized derivative carrying a dihydrouracil is predicted to be exothermic by 61.1 kJ/mol in the gas phase.

SUBMITTER: Achrainer F

PROVIDER: S-EPMC6271186 | biostudies-literature | 2014 Dec

REPOSITORIES: biostudies-literature

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Transfer hydrogenation in open-shell nucleotides - a theoretical survey.

Achrainer Florian F Zipse Hendrik H

Molecules (Basel, Switzerland) 20141222 12

The potential of a larger number of sugar models to act as dihydrogen donors in transfer hydrogenation reactions has been quantified through the calculation of hydrogenation energies of the respective oxidized products. Comparison of the calculated energies to hydrogenation energies of nucleobases shows that many sugar fragment radicals can reduce pyrimidine bases such as uracil in a strongly exothermic fashion. The most potent reducing agent is the C3' ribosyl radical. The energetics of intramo ...[more]

PMID: 25532845

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