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Joint testing and false discovery rate control in high-dimensional multivariate regression.


ABSTRACT: Multivariate regression with high-dimensional covariates has many applications in genomic and genetic research, in which some covariates are expected to be associated with multiple responses. This paper considers joint testing for regression coefficients over multiple responses and develops simultaneous testing methods with false discovery rate control. The test statistic is based on inverse regression and bias-corrected group lasso estimates of the regression coefficients and is shown to have an asymptotic chi-squared null distribution. A row-wise multiple testing procedure is developed to identify the covariates associated with the responses. The procedure is shown to control the false discovery proportion and false discovery rate at a prespecified level asymptotically. Simulations demonstrate the gain in power, relative to entrywise testing, in detecting the covariates associated with the responses. The test is applied to an ovarian cancer dataset to identify the microRNA regulators that regulate protein expression.

SUBMITTER: Xia Y 

PROVIDER: S-EPMC6374004 | biostudies-literature | 2018 Jun

REPOSITORIES: biostudies-literature

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Joint testing and false discovery rate control in high-dimensional multivariate regression.

Xia Yin Y   Cai T Tony TT   Li Hongzhe H  

Biometrika 20180216 2


Multivariate regression with high-dimensional covariates has many applications in genomic and genetic research, in which some covariates are expected to be associated with multiple responses. This paper considers joint testing for regression coefficients over multiple responses and develops simultaneous testing methods with false discovery rate control. The test statistic is based on inverse regression and bias-corrected group lasso estimates of the regression coefficients and is shown to have a  ...[more]

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