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TransLiG: a de novo transcriptome assembler that uses line graph iteration.


ABSTRACT: We present TransLiG, a new de novo transcriptome assembler, which is able to integrate the sequence depth and pair-end information into the assembling procedure by phasing paths and iteratively constructing line graphs starting from splicing graphs. TransLiG is shown to be significantly superior to all the salient de novo assemblers in both accuracy and computing resources when tested on artificial and real RNA-seq data. TransLiG is freely available at https://sourceforge.net/projects/transcriptomeassembly/files/ .

SUBMITTER: Liu J 

PROVIDER: S-EPMC6480747 | biostudies-literature | 2019 Apr

REPOSITORIES: biostudies-literature

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Publications

Child and Interviewer Race in Forensic Interviewing.

Fisher Amy K AK   Mackey Tomiko D TD   Langendoen Carol C   Barnard Marie M  

Journal of child sexual abuse 20160812 7


The purpose of this study was to examine the potential effect of child race and interviewer race on forensic interviewing outcomes. The results of the regression analysis indicated that child race and interviewer race had a significant effect on interview outcome category (no findings, inconclusive, or findings consistent with sexual abuse). Furthermore, the results indicate that the interaction of child and interviewer race had predictive value for rates of findings consistent with sexual abuse  ...[more]

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