Dataset Information

INFERENCE FOR LOW-DIMENSIONAL COVARIATES IN A HIGH-DIMENSIONAL ACCELERATED FAILURE TIME MODEL.

ABSTRACT: Data with high-dimensional covariates are now commonly encountered. Compared to other types of responses, research on high-dimensional data with censored survival responses is still relatively limited, and most of the existing studies have been focused on estimation and variable selection. In this study, we consider data with a censored survival response, a set of low-dimensional covariates of main interest, and a set of high-dimensional covariates that may also affect survival. The accelerated failure time model is adopted to describe survival. The goal is to conduct inference for the effects of low-dimensional covariates, while properly accounting for the high-dimensional covariates. A penalization-based procedure is developed, and its validity is established under mild and widely adopted conditions. Simulation suggests satisfactory performance of the proposed procedure, and the analysis of two cancer genetic datasets demonstrates its practical applicability.

SUBMITTER: Chai H

PROVIDER: S-EPMC6502249 | biostudies-literature | 2019 Apr

REPOSITORIES: biostudies-literature

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INFERENCE FOR LOW-DIMENSIONAL COVARIATES IN A HIGH-DIMENSIONAL ACCELERATED FAILURE TIME MODEL.

Chai Hao H Zhang Qingzhao Q Huang Jian J Ma Shuangge S

Statistica Sinica 20190401 2

Data with high-dimensional covariates are now commonly encountered. Compared to other types of responses, research on high-dimensional data with censored survival responses is still relatively limited, and most of the existing studies have been focused on estimation and variable selection. In this study, we consider data with a censored survival response, a set of low-dimensional covariates of main interest, and a set of high-dimensional covariates that may also affect survival. The accelerated ...[more]

PMID: 31073263

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Project description:In this paper, the accelerated failure time (AFT) model is modified to analyze post-work grocery shopping activity duration. Much previous shopping duration analysis was conducted using the proportional hazard (PH) modeling approach. Once the proportionality assumption was violated, the traditional accelerated failure time (TAFT) model was usually selected as an alternative modeling approach. However, a TAFT model only has covariates with non-proportional and time-dependent effects on the hazard overtime while a PH model only accommodates covariates with proportional and time-independent effects. Neither of them considers the possibility that some of covariates may have proportional and time-independent effects and some may have non-proportional and time-dependent effects on the hazard value in one model. To address this issue, the paper generalizes the TAFT model and develops a modified accelerated failure time (MAFT) model to accommodate both time-dependent and time-independent covariates for activity duration analysis. Checking on the proportionality assumption indicates that the assumption is not valid in the post-work grocery shopping activity data extracted from the 2017 National Household Travel Survey (NHTS) conducted by the U.S. Department of Transportation (USDOT). Both TAFT and MAFT models are developed for comparisons and analysis. The empirical and statistical results show that there do exist two different types of covariates affecting shopping activity duration, including covariates only with proportional and time-independent effects (i.e. working duration, commute travel time) and those with non-proportional and time-dependent effects. The MAFT model can capture the subtleties in various types of covariate effects and help better understand how those covariates affect activity duration overtime. This paper also shows the importance to develop a flexible duration model with both time-dependent and time-independent covariates for accurately evaluating travel demand management (TDM) policies, like flexible work hours.

Dataset Information

INFERENCE FOR LOW-DIMENSIONAL COVARIATES IN A HIGH-DIMENSIONAL ACCELERATED FAILURE TIME MODEL.

Publications

INFERENCE FOR LOW-DIMENSIONAL COVARIATES IN A HIGH-DIMENSIONAL ACCELERATED FAILURE TIME MODEL.

Similar Datasets

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