Dataset Information

Sodium dirubidium citrate, NaRb2C6H5O7, and sodium dirubidium citrate dihydrate, NaRb2C6H5O7(H2O)2.

ABSTRACT: The crystal structures of sodium dirubidium citrate {poly[?-citrato-dirubi-dium(I)sodium(I)], [NaRb2(C6H5O7)] n } and sodium dirubidium citrate dihydrate {poly[di-aqua-(?-citrato)dirubidium(I)sodium(I)], [NaRb2(C6H5O7)(H2O)2] n } have been solved and refined using laboratory X-ray powder diffraction data, and optimized using density functional techniques. Both structures contain Na chains and Rb layers, which link to form different three-dimensional frameworks. In each structure, the citrate triply chelates to the Na+ cation. Each citrate also chelates to Rb+ cations. In the dihydrate structure, the water mol-ecules are bonded to the Rb+ cations; the Na+ cation is coordinated only to citrate O atoms. Both structures contain an intra-molecular O-H?O hydrogen bond between the hy-droxy group and one of the terminal carboxyl-ate groups. In the structure of the dihydrate, each hydrogen atom of the water mol-ecules participates in a hydrogen bond to an ionized carboxyl-ate group.

SUBMITTER: Cigler AJ

PROVIDER: S-EPMC6509689 | biostudies-literature | 2019 Apr

REPOSITORIES: biostudies-literature

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Sodium dirubidium citrate, NaRb2C6H5O7, and sodium dirubidium citrate dihydrate, NaRb2C6H5O7(H2O)2.

Cigler Andrew J AJ Kaduk James A JA

Acta crystallographica. Section E, Crystallographic communications 20190311 Pt 4

The crystal structures of sodium dirubidium citrate {poly[μ-citrato-dirubi-dium(I)sodium(I)], [NaRb2(C6H5O7)] n } and sodium dirubidium citrate dihydrate {poly[di-aqua-(μ-citrato)dirubidium(I)sodium(I)], [NaRb2(C6H5O7)(H2O)2] n } have been solved and refined using laboratory X-ray powder diffraction data, and optimized using density functional techniqu ...[more]

PMID: 31161051

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Project description:The crystal structure of sodium rubidium hydrogen citrate, NaRbHC6H5O7 or [NaRb(C6H6O7)] n , has been solved and refined using laboratory powder X-ray diffraction data, and optimized using density functional techniques. This compound is isostructural to NaKHC6H5O7. The Na atom is six-coordinate, with a bond-valence sum of 1.16. The Rb atom is eight-coordinate, with a bond-valence sum of 1.17. The distorted [NaO6] octa-hedra share edges to form chains along the a-axis direction. The irregular [RbO8] coordination polyhedra share edges with the [NaO6] octa-hedra on either side of the chain, and share corners with other Rb atoms, resulting in triple chains along the a-axis direction. The most prominent feature of the structure is the chain along [111] of very short, very strong hydrogen bonds; the O?O distances are 2.426 and 2.398?Å. The Mulliken overlap populations in these hydrogen bonds are 0.140 and 0.143 electrons, which correspond to hydrogen-bond energies of about 20.3?kcal?mol-1. The crystal structure of sodium caesium hydrogen citrate, NaCsHC6H5O7 or [NaCs(C6H6O7)] n , has also been solved and refined using laboratory powder X-ray diffraction data, and optimized using density functional techniques. The Na atom is six-coordinate, with a bond-valence sum of 1.15. The Cs atom is eight-coordinate, with a bond-valence sum of 0.97. The distorted trigonal-prismatic [NaO6] coordination polyhedra share edges to form zigzag chains along the b-axis direction. The irregular [CsO8] coordination polyhedra share edges with the [NaO6] polyhedra to form layers parallel to the (101) plane, unlike the isolated chains in NaKHC6H5O7 and NaRbHC6H5O7. A prominent feature of the structure is the chain along [100] of very short, very strong O-H?O hydrogen bonds; the refined O?O distances are 2.398 and 2.159?Å, and the optimized distances are 2.398 and 2.347?Å. The Mulliken overlap populations in these hydrogen bonds are 0.143 and 0.133 electrons, which correspond to hydrogen-bond energies about 20.3?kcal?mol-1.

Dataset Information

Sodium dirubidium citrate, NaRb2C6H5O7, and sodium dirubidium citrate dihydrate, NaRb2C6H5O7(H2O)2.

Publications

Sodium dirubidium citrate, NaRb<sub>2</sub>C<sub>6</sub>H<sub>5</sub>O<sub>7</sub>, and sodium dirubidium citrate dihydrate, NaRb<sub>2</sub>C<sub>6</sub>H<sub>5</sub>O<sub>7</sub>(H<sub>2</sub>O)<sub>2</sub>.

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