Dataset Information

Phylogeographical and Morphological Analyses of Triplophysa stenura (Cypriniformes: Nemacheilidae) from the Three Parallel Rivers Region, China.

ABSTRACT: Qiu Ren, Jun-Xing Yang, and Xiao-Yong Chen (2018) Triplophysa stenura is an indigenous and widely distributed loach in the Qinghai-Tibet plateau and adjacent Three Parallel Rivers region of China. Morphological and phylogenetic analyses were performed in order to explore the genetic and morphological variation in T. stenura populations from different geographic regions and infer the divergence time and relationships between populations from the three rivers (Jinsha River, Nu River and Lancang River). Two mitochondrial genes (Cyt b, D-Loop) and 35 morphological characters were selected for genetic and morphological analyses, respectively. Phylogenetic and network analyses reveal that T. stenura is a single lineage with three well supported clades strictly corresponding to specific river systems. Divergence time analysis suggests that the divergence of T. stenura and formation of the Three Parallel Rivers are closely associated with the Kun-Huang Movement (1.1- 0.6 MYA), which lead to the uplift of the Qinghai-Tibet plateau. AMOVA reveals that there is moderate genetic differentiation among populations. Results from ANOVA suggest that several morphological characters show significant variation among populations and drainages. Descriptive morphological variation (e.g., color pattern) in different populations of T. stenura clarifies a set of characters that can be used to accurately identify members of this group in the future. We conclude that T. stenura has moderate population genetic structure and character variation in this study area and the divergence and evolution of T. stenura is associated with the uplift of the Qinghai-Tibet plateau.

SUBMITTER: Ren Q

PROVIDER: S-EPMC6517708 | biostudies-literature | 2018

REPOSITORIES: biostudies-literature

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Phylogeographical and Morphological Analyses of Triplophysa stenura (Cypriniformes: Nemacheilidae) from the Three Parallel Rivers Region, China.

Ren Qiu Q Yang Jun-Xing JX Chen Xiao-Yong XY

Zoological studies 20180611

Qiu Ren, Jun-Xing Yang, and Xiao-Yong Chen (2018) Triplophysa stenura is an indigenous and widely distributed loach in the Qinghai-Tibet plateau and adjacent Three Parallel Rivers region of China. Morphological and phylogenetic analyses were performed in order to explore the genetic and morphological variation in T. stenura populations from different geographic regions and infer the divergence time and relationships between populations from the three rivers (Jinsha River, Nu ...[more]

PMID: 31966266

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Project description:BackgroundMicroplastics (MPs) has been rapidly increasing and interacting with wildlife. As the highest altitudes inhabited non-human primate, Yunnan snub-nosed monkey (Rhinopithecus bieti) have been proven to be an umbrella and flagship species to indicate ecosystem changes and help develop environmental management strategies. In this study, we aimed to investigate the behavioral and ecological reasons for the types, content and differences of MPs in the feces of R. bieti, and explored the effects of MPs on gut microbiome of R. bieti.MethodsWe used the Agilent 8700 LDIR to identify the abundance and size distribution of MPs in fecal samples, and then analyzed the causes of differences in MPs content by combining data from different populations (wild group, provisioned wild group) and dominance hierarchy. At the same times, the relationships were investigated between gut microbiome diversity and MPs content.ResultsWe first demonstrate MPs ingestion by R. bieti, which highlights the potential impacts of MPs pollution in such high-altitude, inaccessible protected areas. A total of 36 types of MPs were detected, with an average of 75.263 ± 58.141MPs/g. Food provisioning and tourism significantly increased the content of MPs in the feces of R. bieti, but tourism alone did not significantly increase the content of MPs as food provisioning. At the same time, the study found that there was no significant difference in the content of MPs between different sex groups, however, the feces MPs content of adult R. bieti was significantly lower than that of juvenile, and the social dominance hierarchies among OMUs was positively correlated with the exposure of MPs. The current level of MPs pollution did not cause gut microbiome dysbiosis of R. bieti.ConclusionOur study proved from behavioral and ecological perspectives that the R. bieti exposure to MPs was related to provisioned food, and was closely related to dominance hierarchy and age. From the perspective of intestinal microbiology, it was proved that the current intake of MPs did not cause gut microbiome dysbiosis of R. bieti. Our study provided scientific basis for formulating effective protection measures and promoting the effective protection of rare and endangered animals.

Project description:In recent years, the influence of historical geological and climatic events on the evolution of flora and fauna in the Tibetan Plateau has been a hot research topic. The Qilian Mountain region is one of the most important sources of biodiversity on the Qinghai-Tibet Plateau. Many species existed in the region during the Pleistocene glacial oscillation, and the complex geographical environment provided suitable conditions for the survival of local species. The shrinkage, expansion, and transfer of the distribution range and population size of species have significant effects on genetic diversity and intraspecific differentiation. To reveal the effects of geological uplift and climate oscillation on the evolution of fish populations in the Qilian Mountains, we investigated the genetic structure, phylogenetic relationship, and phylogeographical characteristics of genus Triplophysa species in the Qilian Mountains using the mitochondrial DNA gene (COI), three nuclear genes (RAG1, sRH, and Myh6) and 11 pairs of nuclear microsatellite markers. We collected 11 species of genus Triplophysa living in the Qilian Mountains, among which Triplophysa hsutschouensis and Triplophysa papillosolabiata are widely distributed in the rivers on the northern slope of the Qilian Mountains. There was a high degree of lineage differentiation among species, and the genetic diversity of endemic species was low. The different geographical groups of T. papillosolabiata presented some allogeneic adaptation and differentiation, which was closely related to the changes in the river system. Except for the population expansion event of T. hsutschouensis during the last glacial period of the Qinghai-Tibet Plateau (0.025 MYA), the population sizes of other plateau loach species remained stable without significant population expansion. Starting from the east and west sides of the Qilian Mountains, T. hsutschouensis, and T. papillosolabiata showed two species colonization routes in opposite directions. The geological events of the uplift of the Qinghai-Tibet Plateau and the climatic oscillation of the Quaternary glaciation had a great influence on the genetic structure of the plateau loach in the Qilian Mountains, which promoted the genetic differentiation of the plateau loach and formed some unique new species. The results of this study have important guiding significance for fish habitat protection in the Qilian Mountains.

Dataset Information

Phylogeographical and Morphological Analyses of Triplophysa stenura (Cypriniformes: Nemacheilidae) from the Three Parallel Rivers Region, China.

Publications

Phylogeographical and Morphological Analyses of <i>Triplophysa stenura</i> (Cypriniformes: Nemacheilidae) from the Three Parallel Rivers Region, China.

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