Ontology highlight
ABSTRACT:
SUBMITTER: Singer JB
PROVIDER: S-EPMC6520954 | biostudies-literature | 2019 Apr
REPOSITORIES: biostudies-literature
Singer Joshua B JB Thomson Emma C EC Hughes Joseph J Aranday-Cortes Elihu E McLauchlan John J da Silva Filipe Ana A Tong Lily L Manso Carmen F CF Gifford Robert J RJ Robertson David L DL Barnes Eleanor E Ansari M Azim MA Mbisa Jean L JL Bibby David F DF Bradshaw Daniel D Smith David D
Viruses 20190403 4
Using deep sequencing technologies such as Illumina's platform, it is possible to obtain reads from the viral RNA population revealing the viral genome diversity within a single host. A range of software tools and pipelines can transform raw deep sequencing reads into Sequence Alignment Mapping (SAM) files. We propose that interpretation tools should process these SAM files, directly translating individual reads to amino acids in order to extract statistics of interest such as the proportion of ...[more]