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Molecular subtypes of diffuse large B cell lymphoma are associated with distinct pathogenic mechanisms and outcomes.


ABSTRACT: Diffuse large B cell lymphoma (DLBCL), the most common lymphoid malignancy in adults, is a clinically and genetically heterogeneous disease that is further classified into transcriptionally defined activated B cell (ABC) and germinal center B cell (GCB) subtypes. We carried out a comprehensive genetic analysis of 304 primary DLBCLs and identified low-frequency alterations, captured recurrent mutations, somatic copy number alterations, and structural variants, and defined coordinate signatures in patients with available outcome data. We integrated these genetic drivers using consensus clustering and identified five robust DLBCL subsets, including a previously unrecognized group of low-risk ABC-DLBCLs of extrafollicular/marginal zone origin; two distinct subsets of GCB-DLBCLs with different outcomes and targetable alterations; and an ABC/GCB-independent group with biallelic inactivation of TP53, CDKN2A loss, and associated genomic instability. The genetic features of the newly characterized subsets, their mutational signatures, and the temporal ordering of identified alterations provide new insights into DLBCL pathogenesis. The coordinate genetic signatures also predict outcome independent of the clinical International Prognostic Index and suggest new combination treatment strategies. More broadly, our results provide a roadmap for an actionable DLBCL classification.

SUBMITTER: Chapuy B 

PROVIDER: S-EPMC6613387 | biostudies-literature | 2018 May

REPOSITORIES: biostudies-literature

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Molecular subtypes of diffuse large B cell lymphoma are associated with distinct pathogenic mechanisms and outcomes.

Chapuy Bjoern B   Stewart Chip C   Dunford Andrew J AJ   Kim Jaegil J   Kamburov Atanas A   Redd Robert A RA   Lawrence Mike S MS   Roemer Margaretha G M MGM   Li Amy J AJ   Ziepert Marita M   Staiger Annette M AM   Wala Jeremiah A JA   Ducar Matthew D MD   Leshchiner Ignaty I   Rheinbay Ester E   Taylor-Weiner Amaro A   Coughlin Caroline A CA   Hess Julian M JM   Pedamallu Chandra S CS   Livitz Dimitri D   Rosebrock Daniel D   Rosenberg Mara M   Tracy Adam A AA   Horn Heike H   van Hummelen Paul P   Feldman Andrew L AL   Link Brian K BK   Novak Anne J AJ   Cerhan James R JR   Habermann Thomas M TM   Siebert Reiner R   Rosenwald Andreas A   Thorner Aaron R AR   Meyerson Matthew L ML   Golub Todd R TR   Beroukhim Rameen R   Wulf Gerald G GG   Ott German G   Rodig Scott J SJ   Monti Stefano S   Neuberg Donna S DS   Loeffler Markus M   Pfreundschuh Michael M   Trümper Lorenz L   Getz Gad G   Shipp Margaret A MA  

Nature medicine 20180430 5


Diffuse large B cell lymphoma (DLBCL), the most common lymphoid malignancy in adults, is a clinically and genetically heterogeneous disease that is further classified into transcriptionally defined activated B cell (ABC) and germinal center B cell (GCB) subtypes. We carried out a comprehensive genetic analysis of 304 primary DLBCLs and identified low-frequency alterations, captured recurrent mutations, somatic copy number alterations, and structural variants, and defined coordinate signatures in  ...[more]

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