Dataset Information

Lipid Analysis of 30?000 Individual Rodent Cerebellar Cells Using High-Resolution Mass Spectrometry.

ABSTRACT: Single-cell measurements aid our understanding of chemically heterogeneous systems such as the brain. Lipids are one of the least studied chemical classes, and their cell-to-cell heterogeneity remains largely unexplored. We adapted microscopy-guided single-cell profiling using matrix-assisted laser desorption/ionization ion cyclotron resonance mass spectrometry to profile the lipid composition of over 30?000 individual rat cerebellar cells. We detected 520 lipid features, many of which were found in subsets of cells; Louvain clustering identified 101 distinct groups that can be correlated to neuronal and astrocytic classifications and lipid classes. Overall, the two most common lipids found were [PC(32:0)+H]+ and [PC(34:1)+H]+, which were present within 98.9 and 89.5% of cells, respectively; lipid signals present in <1% of cells were also detected, including [PC(34:1)+K]+ and [PG(40:2(OH))+Na]+. These results illustrate the vast lipid heterogeneity found within rodent cerebellar cells and hint at the distinct functional consequences of this heterogeneity.

SUBMITTER: Neumann EK

PROVIDER: S-EPMC6660023 | biostudies-literature | 2019 Jun

REPOSITORIES: biostudies-literature

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Lipid Analysis of 30 000 Individual Rodent Cerebellar Cells Using High-Resolution Mass Spectrometry.

Neumann Elizabeth K EK Ellis Joanna F JF Triplett Amelia E AE Rubakhin Stanislav S SS Sweedler Jonathan V JV

Analytical chemistry 20190607 12

Single-cell measurements aid our understanding of chemically heterogeneous systems such as the brain. Lipids are one of the least studied chemical classes, and their cell-to-cell heterogeneity remains largely unexplored. We adapted microscopy-guided single-cell profiling using matrix-assisted laser desorption/ionization ion cyclotron resonance mass spectrometry to profile the lipid composition of over 30 000 individual rat cerebellar cells. We detected 520 lipid features, many of which were foun ...[more]

PMID: 31122012

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Lipid Analysis of 30?000 Individual Rodent Cerebellar Cells Using High-Resolution Mass Spectrometry.

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Lipid Analysis of 30 000 Individual Rodent Cerebellar Cells Using High-Resolution Mass Spectrometry.

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Dataset Information

Lipid Analysis of 30?000 Individual Rodent Cerebellar Cells Using High-Resolution Mass Spectrometry.

Publications

Lipid Analysis of 30 000 Individual Rodent Cerebellar Cells Using High-Resolution Mass Spectrometry.

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OmicsDI is part of the ELIXIR infrastructure

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Lipid Analysis of 30 000 Individual Rodent Cerebellar Cells Using High-Resolution Mass Spectrometry.