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Solving a new R2lox protein structure by microcrystal electron diffraction.


ABSTRACT: Microcrystal electron diffraction (MicroED) has recently shown potential for structural biology. It enables the study of biomolecules from micrometer-sized 3D crystals that are too small to be studied by conventional x-ray crystallography. However, to date, MicroED has only been applied to redetermine protein structures that had already been solved previously by x-ray diffraction. Here, we present the first new protein structure-an R2lox enzyme-solved using MicroED. The structure was phased by molecular replacement using a search model of 35% sequence identity. The resulting electrostatic scattering potential map at 3.0-Å resolution was of sufficient quality to allow accurate model building and refinement. The dinuclear metal cofactor could be located in the map and was modeled as a heterodinuclear Mn/Fe center based on previous studies. Our results demonstrate that MicroED has the potential to become a widely applicable tool for revealing novel insights into protein structure and function.

SUBMITTER: Xu H 

PROVIDER: S-EPMC6685719 | biostudies-literature | 2019 Aug

REPOSITORIES: biostudies-literature

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Solving a new R2lox protein structure by microcrystal electron diffraction.

Xu Hongyi H   Lebrette Hugo H   Clabbers Max T B MTB   Zhao Jingjing J   Griese Julia J JJ   Zou Xiaodong X   Högbom Martin M  

Science advances 20190807 8


Microcrystal electron diffraction (MicroED) has recently shown potential for structural biology. It enables the study of biomolecules from micrometer-sized 3D crystals that are too small to be studied by conventional x-ray crystallography. However, to date, MicroED has only been applied to redetermine protein structures that had already been solved previously by x-ray diffraction. Here, we present the first new protein structure-an R2lox enzyme-solved using MicroED. The structure was phased by m  ...[more]

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