Bayesian estimation of past population dynamics in BEAST 1.10 using the Skygrid coalescent model.
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ABSTRACT:
SUBMITTER: Hill V
PROVIDER: S-EPMC6805224 | biostudies-literature | 2019 Jul
REPOSITORIES: biostudies-literature
Publications
Bayesian Estimation of Past Population Dynamics in BEAST 1.10 Using the Skygrid Coalescent Model.
Molecular biology and evolution 20191101 11
Inferring past population dynamics over time from heterochronous molecular sequence data is often achieved using the Bayesian Skygrid model, a nonparametric coalescent model that estimates the effective population size over time. Available in BEAST, a cross-platform program for Bayesian analysis of molecular sequences using Markov chain Monte Carlo, this coalescent model is often estimated in conjunction with a molecular clock model to produce time-stamped phylogenetic trees. We here provide a p ...[more]
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