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A conservation palaeobiological perspective on Chesapeake Bay oysters.

ABSTRACT: The eastern oyster plays a vital role in estuarine habitats, acting as an ecosystem engineer and improving water quality. Populations of Chesapeake Bay oysters have declined precipitously in recent decades. The fossil record, which preserves 500 000 years of once-thriving reefs, provides a unique opportunity to study pristine reefs to establish a possible baseline for mitigation. For this study, over 900 fossil oysters were examined from three Pleistocene localities in the Chesapeake region. Data on oyster shell lengths, lifespans and population density were assessed. Comparisons to modern Crassostrea virginica, sampled from monitoring surveys of similar environments, reveal that fossil oysters were significantly larger, longer-lived and more abundant than modern oysters from polyhaline salinity zones. This pattern results from the preferential harvesting of larger, reproductively more active females from the modern population. These fossil data, combined with modern estimates of age-based fecundity and mortality, make it possible to estimate ecosystem services in these long-dead reefs, including filtering capacity, which was an order of magnitude greater in the past than today. Conservation palaeobiology can provide us with a picture of not just what the Chesapeake Bay looked like, but how it functioned, before humans. This article is part of a discussion meeting issue 'The past is a foreign country: how much can the fossil record actually inform conservation?'

SUBMITTER: Lockwood R

PROVIDER: S-EPMC6863492 | biostudies-literature | 2019 Dec

REPOSITORIES: biostudies-literature

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A conservation palaeobiological perspective on Chesapeake Bay oysters.

Lockwood Rowan R Mann Roger R

Philosophical transactions of the Royal Society of London. Series B, Biological sciences 20191104 1788

The eastern oyster plays a vital role in estuarine habitats, acting as an ecosystem engineer and improving water quality. Populations of Chesapeake Bay oysters have declined precipitously in recent decades. The fossil record, which preserves 500 000 years of once-thriving reefs, provides a unique opportunity to study pristine reefs to establish a possible baseline for mitigation. For this study, over 900 fossil oysters were examined from three Pleistocene localities in the Chesapeake region. Dat ...[more]

PMID: 31679486

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Project description:UnlabelledIn the summer of 2010, Vibrio parahaemolyticus caused an outbreak in Maryland linked to the consumption of oysters. Strains isolated from both stool and oyster samples were indistinguishable by pulsed-field gel electrophoresis (PFGE). However, the oysters contained other potentially pathogenic V. parahaemolyticus strains exhibiting different PFGE patterns. In order to assess the identity, genetic makeup, relatedness, and potential pathogenicity of the V. parahaemolyticus strains, we sequenced 11 such strains (2 clinical strains and 9 oyster strains). We analyzed these genomes by in silico multilocus sequence typing (MLST) and determined their phylogeny using a whole-genome MLST (wgMLST) analysis. Our in silico MLST analysis identified six different sequence types (STs) (ST8, ST676, ST810, ST811, ST34, and ST768), with both of the clinical and four of the oyster strains being identified as belonging to ST8. Using wgMLST, we showed that the ST8 strains from clinical and oyster samples were nearly indistinguishable and belonged to the same outbreak, confirming that local oysters were the source of the infections. The remaining oyster strains were genetically diverse, differing in >3,000 loci from the Maryland ST8 strains. eBURST analysis comparing these strains with strains of other STs available at the V. parahaemolyticus MLST website showed that the Maryland ST8 strains belonged to a clonal complex endemic to Asia. This indicates that the ST8 isolates from clinical and oyster sources were likely not endemic to Maryland. Finally, this study demonstrates the utility of whole-genome sequencing (WGS) and associated analyses for source-tracking investigations.ImportanceVibrio parahaemolyticus is an important foodborne pathogen and the leading cause of bacterial infections in the United States associated with the consumption of seafood. In the summer of 2010, Vibrio parahaemolyticus caused an outbreak in Maryland linked to oyster consumption. Strains isolated from stool and oyster samples were indistinguishable by pulsed-field gel electrophoresis (PFGE). The oysters also contained other potentially pathogenic V. parahaemolyticus strains with different PFGE patterns. Since their identity, genetic makeup, relatedness, and potential pathogenicity were unknown, their genomes were determined by using next-generation sequencing. Whole-genome sequencing (WGS) analysis by whole-genome multilocus sequence typing (wgMLST) allowed (i) identification of clinical and oyster strains with matching PFGE profiles as belonging to ST8, (ii) determination of oyster strain diversity, and (iii) identification of the clinical strains as belonging to a clonal complex (CC) described only in Asia. Finally, WGS and associated analyses demonstrated their utility for trace-back investigations.

Project description:Vibrio parahaemolyticus naturally-occurs in brackish and marine waters and is one of the leading causes of seafood-borne illness. Previous work studying the ecology of V. parahaemolyticus is often limited in geographic extent and lacking a full range of environmental measures. This study used a unique, large dataset of surface water samples in the Chesapeake Bay (n=1,385) collected from 148 monitoring stations from 2007 to 2010. Water was analyzed for over 20 environmental parameters with additional meteorological and surrounding land use data. V. parahaemolyticus-specific genetic markers thermolabile hemolysin (tlh), thermostable direct hemolysin (tdh), and tdh-related hemolysin (trh) were assayed using quantitative PCR (qPCR), and interval-censored regression models with non-linear effects were estimated to account for limits of detection and quantitation. tlh was detected in 19.6% of water samples; tdh or trh markers were not detected. Results confirmed previously reported positive associations for V. parahaemolyticus abundance with temperature and turbidity and negative associations with high salinity (> 10-23‰). Furthermore, the salinity relationship was determined to be a function of both low temperature and turbidity, with an increase of either nullifying the high salinity effect. Associations with dissolved oxygen and phosphate also appeared stronger when samples were taken nearby human developments. Renewed focus on the V. parahaemolyticus ecological paradigm is warranted to protect public health.ImportanceVibrio parahaemolyticus is one of the leading causes of seafood-borne illness in the United States and across the globe. Exposure is often through consuming raw or undercooked shellfish. Given the natural presence of the bacterium in the marine environment, improved understanding of its environmental determinants is necessary for future preventative measures. This analysis of environmental Vibrio parahaemolyticus is one of only a few that utilize a large dataset measured over a wide geographic and temporal range. The analysis also includes a large number of environmental parameters for Vibrio modeling, many of which have previously only been tested sporadically, and some of which have not been considered before. The results of the analysis revealed previously unknown relationships between salinity, turbidity, and temperature that provide significant insight into the abundance and persistence of V.parahaemolyticus bacterium in the environment. This information will be essential for developing environmental forecast models for the bacterium.

Dataset Information

A conservation palaeobiological perspective on Chesapeake Bay oysters.

Publications

A conservation palaeobiological perspective on Chesapeake Bay oysters.

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