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KCND3 potassium channel gene variant confers susceptibility to electrocardiographic early repolarization pattern.


ABSTRACT: BACKGROUNDThe presence of an early repolarization pattern (ERP) on the surface ECG is associated with risk of ventricular fibrillation and sudden cardiac death. Family studies have shown that ERP is a highly heritable trait, but molecular genetic determinants are unknown.METHODSTo identify genetic susceptibility loci for ERP, we performed a GWAS and meta-analysis in 2,181 cases and 23,641 controls of European ancestry.RESULTSWe identified a genome-wide significant (P < 5 × 10-8) locus in the potassium voltage-gated channel subfamily D member 3 (KCND3) gene that was successfully replicated in additional 1,124 cases and 12,510 controls. A subsequent joint meta-analysis of the discovery and replication cohorts identified rs1545300 as the lead SNP at the KCND3 locus (OR 0.82 per minor T allele, P = 7.7 × 10-12) but did not reveal additional loci. Colocalization analyses indicate causal effects of KCND3 gene expression levels on ERP in both cardiac left ventricle and tibial artery.CONCLUSIONSIn this study, we identified for the first time to our knowledge a genome-wide significant association of a genetic variant with ERP. Our findings of a locus in the KCND3 gene provide insights not only into the genetic determinants but also into the pathophysiological mechanism of ERP, discovering a promising candidate for functional studies.FUNDINGThis project was funded by the German Center for Cardiovascular Research (DZHK Shared Expertise SE081 - STATS). For detailed funding information per study, see the Supplemental Acknowledgments.

SUBMITTER: Teumer A 

PROVIDER: S-EPMC6962032 | biostudies-literature | 2019 Dec

REPOSITORIES: biostudies-literature

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KCND3 potassium channel gene variant confers susceptibility to electrocardiographic early repolarization pattern.

Teumer Alexander A   Trenkwalder Teresa T   Kessler Thorsten T   Jamshidi Yalda Y   van den Berg Marten E ME   Kaess Bernhard B   Nelson Christopher P CP   Bastiaenen Rachel R   De Bortoli Marzia M   Rossini Alessandra A   Deisenhofer Isabel I   Stark Klaus K   Assa Solmaz S   Braund Peter S PS   Cabrera Claudia C   Dominiczak Anna F AF   Gögele Martin M   Hall Leanne M LM   Ikram M Arfan MA   Kavousi Maryam M   Lackner Karl J KJ   Müller Christian C   Münzel Thomas T   Nauck Matthias M   Padmanabhan Sandosh S   Pfeiffer Norbert N   Spector Tim D TD   Uitterlinden Andre G AG   Verweij Niek N   Völker Uwe U   Warren Helen R HR   Zafar Mobeen M   Felix Stephan B SB   Kors Jan A JA   Snieder Harold H   Munroe Patricia B PB   Pattaro Cristian C   Fuchsberger Christian C   Schmidt Georg G   Nolte Ilja M IM   Schunkert Heribert H   Pramstaller Peter P PP   Wild Philipp S PS   van der Harst Pim P   Stricker Bruno H BH   Schnabel Renate B RB   Samani Nilesh J NJ   Hengstenberg Christian C   Dörr Marcus M   Behr Elijah R ER   Reinhard Wibke W  

JCI insight 20191205 23


BACKGROUNDThe presence of an early repolarization pattern (ERP) on the surface ECG is associated with risk of ventricular fibrillation and sudden cardiac death. Family studies have shown that ERP is a highly heritable trait, but molecular genetic determinants are unknown.METHODSTo identify genetic susceptibility loci for ERP, we performed a GWAS and meta-analysis in 2,181 cases and 23,641 controls of European ancestry.RESULTSWe identified a genome-wide significant (P < 5 × 10-8) locus in the pot  ...[more]

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