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Stochastic transcriptional pulses orchestrate flagellar biosynthesis in Escherichia coli.


ABSTRACT: The classic picture of flagellum biosynthesis in Escherichia coli, inferred from population measurements, depicts a deterministic program where promoters are sequentially up-regulated and are maintained steadily active throughout exponential growth. However, complex regulatory dynamics at the single-cell level can be masked by bulk measurements. Here, we discover that in individual E. coli cells, flagellar promoters are stochastically activated in pulses. These pulses are coordinated within specific classes of promoters and comprise "on" and "off" states, each of which can span multiple generations. We demonstrate that in this pulsing program, the regulatory logic of flagellar assembly dictates which promoters skip pulses. Surprisingly, pulses do not require specific transcriptional or translational regulation of the flagellar master regulator, FlhDC, but instead appears to be essentially governed by an autonomous posttranslational circuit. Our results suggest that even topologically simple transcriptional networks can generate unexpectedly rich temporal dynamics and phenotypic heterogeneities.

SUBMITTER: Kim JM 

PROVIDER: S-EPMC7002133 | biostudies-literature | 2020 Feb

REPOSITORIES: biostudies-literature

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Stochastic transcriptional pulses orchestrate flagellar biosynthesis in <i>Escherichia coli</i>.

Kim J Mark JM   Garcia-Alcala Mayra M   Balleza Enrique E   Cluzel Philippe P  

Science advances 20200205 6


The classic picture of flagellum biosynthesis in <i>Escherichia coli</i>, inferred from population measurements, depicts a deterministic program where promoters are sequentially up-regulated and are maintained steadily active throughout exponential growth. However, complex regulatory dynamics at the single-cell level can be masked by bulk measurements. Here, we discover that in individual <i>E. coli</i> cells, flagellar promoters are stochastically activated in pulses. These pulses are coordinat  ...[more]

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