Dataset Information

Genotype and Environment Effects on Prebiotic Carbohydrate Concentrations in Kabuli Chickpea Cultivars and Breeding Lines Grown in the U.S. Pacific Northwest.

ABSTRACT: Prebiotic carbohydrates are compounds that include simple sugars, sugar alcohols, and raffinose family oligosaccharides, which are fermented by gut bacteria and can influence the species profile of the gut microbiome to reduce obesity and weight gain. Prebiotic carbohydrates are also associated with several health benefits including reduced insulin dependence and incidence of colorectal cancer. Although pulse crops such as chickpea have been important sources of nutrition for human diets for thousands of years, relatively little is known about the profiles of prebiotic carbohydrates in pulse crops. The objectives of this study were to characterize the type and concentration of seed prebiotic carbohydrates in 18 kabuli chickpea genotypes grown in 2017 and 2018 in Idaho and Washington, and partition variance components conditioning these nutritional quality traits in chickpea. Genotype effects were significant for fructose, sucrose, raffinose, and kestose. Environment effects were also significant for several carbohydrates. However, year effects were the greatest sources of variance for all carbohydrates. Concentrations of most carbohydrates were significantly greater in 2017, when there was less precipitation during the growing season coupled with greater heat stress during grain filling than in 2018. This may reflect the role of many of these carbohydrates as osmoprotectants produced in response to heat and water stress. Overall, our results suggest that a survey of more genetically diverse plant materials, such as a chickpea 'mini-core' collection, may reveal genotypes that produce significantly greater concentrations of selected prebiotic carbohydrates and could be used to introduce desirable nutritional traits into adapted chickpea cultivars.

SUBMITTER: Vandemark G

PROVIDER: S-EPMC7046681 | biostudies-literature | 2020

REPOSITORIES: biostudies-literature

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Genotype and Environment Effects on Prebiotic Carbohydrate Concentrations in Kabuli Chickpea Cultivars and Breeding Lines Grown in the U.S. Pacific Northwest.

Vandemark George G Thavarajah Samadhi S Siva Niroshan N Thavarajah Dil D

Frontiers in plant science 20200221

Prebiotic carbohydrates are compounds that include simple sugars, sugar alcohols, and raffinose family oligosaccharides, which are fermented by gut bacteria and can influence the species profile of the gut microbiome to reduce obesity and weight gain. Prebiotic carbohydrates are also associated with several health benefits including reduced insulin dependence and incidence of colorectal cancer. Although pulse crops such as chickpea have been important sources of nutrition for human diets for tho ...[more]

PMID: 32153615

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Project description:The concept of 'crop ideotype' is coined as a desirable plant model expected to better perform for seed yield, oils and other useful characteristics when developed as a cultivar, and it consists of two major approaches, namely, (i) 'defect elimination', that is, integration of disease resistance to a susceptible genotype from a resistant genotype and (ii) 'selection for yield' by improving yield after crosses between desirable parents. For consideration of these approaches, here we introduced an ideotype in kabuli chickpea (Cicer arietinum L.) which is high-yielding, extra-large-seeded, and double- or multi-podded, has high plant height and imparipinnate-leafed traits, and is heat tolerant and resistant to ascochyta blight [Ascochyta rabiei (Pass.) Labr.], which causes considerable yield losses, via marker-assisted selection. F3 and F4 lines were evaluated for agro-morphological traits divided into six classes, namely, (i) imparipinnate-leafed and single-podded progeny, (ii) imparipinnate-leafed and double-podded progeny, (iii) imparipinnate-leafed and multi-podded progeny, (iv) unifoliolate-leafed and single-podded progeny, (v) unifoliolate-leafed and double-podded progeny, (vi) unifoliolate-leafed and multi-podded progeny. F3:4 lines having 100-seed weight ≥ 45 g and double- or multi-podded traits were additionally assessed for resistance to ascochyta blight using molecular markers including SCY17590 and CaETR-1. Superior lines having higher values than their best parents were determined for all studied traits indicating that economic and important traits including yield and seed size in chickpea could be improved by crossing suitable parents. Imparipinnate-leafed and multi-podded plants had not only the highest number of pods and seeds per plant but also the highest yield. On the other hand, imparipinnate-leafed and single podded progeny had the largest seed size, followed by imparipinnate-leafed and double-podded progeny. Multi-podded plants produced 23% more seed yield than that of single-podded plants, while multi-podded plants attained 7.6% more seed yield than that of double-podded plants. SCY17590 and CaETR-1 markers located on LG4 related to QTLAR2 and QTLAR1 were found in 14 lines among 152 F3:4 lines. Six superior lines were selected for being double- or multi-podded, imparipinnate-leafed, suitable for combine harvest, heat-tolerant, and resistant to ascochyta blight, and having both of two resistance markers and extra-large seeds as high as 50-60 g per 100-seed weight. Resistance alleles from two different backgrounds for resistance to ascochyta blight were integrated with double- or multi-podded kabuli chickpea lines having high yield, extra-large seeds, high plant height, imparipinnate-leaves and high heat tolerance, playing a crucial role for future demands of population and food security. These approaches seem to be applicable in ideotype breeding for other important crop plants.

Project description:Pakistan is among top three chickpea producing countries but the crop is usually grown on marginal lands without irrigation and fertilizer application which significantly hampers its yield. Soil fertility and inoculation with beneficial rhizobacteria play a key role in nodulation and yield of legumes. Four kabuli and six desi chickpea genotypes were, therefore, evaluated for inoculation response with IAA-producing Ochrobactrum ciceri Ca-34(T) and nitrogen fixing Mesorhizobium ciceri TAL-1148 in single and co-inoculation in two soils. The soil type 1 was previously unplanted marginal soil having low organic matter, P and N contents compared to soil type 2 which was a fertile routinely legume-cultivated soil. The effect of soil fertility status was pronounced and fertile soil on average, produced 31% more nodules, 62% more biomass and 111% grain yield than marginal soil. Inoculation either with O. ciceri alone or its co-inoculation with M. ciceri produced on average higher nodules (42%), biomass (31%), grains yield (64%) and harvest index (72%) in both chickpea genotypes over non-inoculated controls in both soils. Soil 1 showed maximum relative effectiveness of Ca-34(T) inoculation for kabuli genotypes while soil 2 showed for desi genotypes except B8/02. Desi genotype B8/02 in soil type 1 and Pb-2008 in soil type 2 showed significant yield increase as compared to respective un-inoculated controls. Across bacterial inoculation treatments, grain yield was positively correlated to growth and yield contributing parameters (r = 0.294(*) to 0.838(***) for desi and r = 0.388(*) to 0.857(**) for kabuli). PCA and CAT-PCA analyses clearly showed a site-specific response of genotype x bacterial inoculation. Furthermore, the inoculated bacterial strains were able to persist in the rhizosphere showing colonization on root and within nodules. Present study shows that plant growth promoting rhizobacteria (PGPR) inoculation should be integrated with national chickpea breading program in Pakistan especially for marginal soils. Furthermore, the study shows the potential of phytohormone producing strain Ca-34(T) as promising candidate for development of biofertilizer alongwith nodulating strains to get sustainable yield of kabuli and desi chickpea with minimum inputs at marginal land.

Dataset Information

Genotype and Environment Effects on Prebiotic Carbohydrate Concentrations in Kabuli Chickpea Cultivars and Breeding Lines Grown in the U.S. Pacific Northwest.

Publications

Genotype and Environment Effects on Prebiotic Carbohydrate Concentrations in Kabuli Chickpea Cultivars and Breeding Lines Grown in the U.S. Pacific Northwest.

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