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Predicting pregnancy test results after embryo transfer by image feature extraction and analysis using machine learning.


ABSTRACT: Assessing the viability of a blastosyst is still empirical and non-reproducible nowadays. We developed an algorithm based on artificial vision and machine learning (and other classifiers) that predicts pregnancy using the beta human chorionic gonadotropin (b-hCG) test from both the morphology of an embryo and the age of the patients. We employed two high-quality databases with known pregnancy outcomes (n = 221). We created a system consisting of different classifiers that is feed with novel morphometric features extracted from the digital micrographs, along with other non-morphometric data to predict pregnancy. It was evaluated using five different classifiers: probabilistic bayesian, Support Vector Machines (SVM), deep neural network, decision tree, and Random Forest (RF), using a k-fold cross validation to assess the model's generalization capabilities. In the database A, the SVM classifier achieved an F1 score of 0.74, and AUC of 0.77. In the database B the RF classifier obtained a F1 score of 0.71, and AUC of 0.75. Our results suggest that the system is able to predict a positive pregnancy test from a single digital image, offering a novel approach with the advantages of using a small database, being highly adaptable to different laboratory settings, and easy integration into clinical practice.

SUBMITTER: Chavez-Badiola A 

PROVIDER: S-EPMC7064494 | biostudies-literature | 2020 Mar

REPOSITORIES: biostudies-literature

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Predicting pregnancy test results after embryo transfer by image feature extraction and analysis using machine learning.

Chavez-Badiola Alejandro A   Flores-Saiffe Farias Adolfo A   Mendizabal-Ruiz Gerardo G   Garcia-Sanchez Rodolfo R   Drakeley Andrew J AJ   Garcia-Sandoval Juan Paulo JP  

Scientific reports 20200310 1


Assessing the viability of a blastosyst is still empirical and non-reproducible nowadays. We developed an algorithm based on artificial vision and machine learning (and other classifiers) that predicts pregnancy using the beta human chorionic gonadotropin (b-hCG) test from both the morphology of an embryo and the age of the patients. We employed two high-quality databases with known pregnancy outcomes (n = 221). We created a system consisting of different classifiers that is feed with novel morp  ...[more]

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2020-07-08 | GSE137437 | GEO