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Keth-seq for transcriptome-wide RNA structure mapping.


ABSTRACT: RNA secondary structure is critical to RNA regulation and function. We report a new N3-kethoxal reagent that allows fast and reversible labeling of single-stranded guanine bases in live cells. This N3-kethoxal-based chemistry allows efficient RNA labeling under mild conditions and transcriptome-wide RNA secondary structure mapping.

SUBMITTER: Weng X 

PROVIDER: S-EPMC7182492 | biostudies-literature | 2020 May

REPOSITORIES: biostudies-literature

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RNA secondary structure is critical to RNA regulation and function. We report a new N<sub>3</sub>-kethoxal reagent that allows fast and reversible labeling of single-stranded guanine bases in live cells. This N<sub>3</sub>-kethoxal-based chemistry allows efficient RNA labeling under mild conditions and transcriptome-wide RNA secondary structure mapping. ...[more]

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