Dataset Information

Planning High-Quality Motions for Concentric Tube Robots in Point Clouds via Parallel Sampling and Optimization.

ABSTRACT: We present a method that plans motions for a concentric tube robot to automatically reach surgical targets inside the body while avoiding obstacles, where the patient's anatomy is represented by point clouds. Point clouds can be generated intra-operatively via endoscopic instruments, enabling the system to update obstacle representations over time as the patient anatomy changes during surgery. Our new motion planning method uses a combination of sampling-based motion planning methods and local optimization to efficiently handle point cloud data and quickly compute high quality plans. The local optimization step uses an interior point optimization method, ensuring that the computed plan is feasible and avoids obstacles at every iteration. This enables the motion planner to run in an anytime fashion, i.e., the method can be stopped at any time and the best solution found up until that point is returned. We demonstrate the method's efficacy in three anatomical scenarios, including two generated from endoscopic videos of real patient anatomy.

SUBMITTER: Kuntz A

PROVIDER: S-EPMC7191995 | biostudies-literature | 2019 Nov

REPOSITORIES: biostudies-literature

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Publications

Planning High-Quality Motions for Concentric Tube Robots in Point Clouds via Parallel Sampling and Optimization.

Kuntz Alan A Fu Mengyu M Alterovitz Ron R

Proceedings of the ... IEEE/RSJ International Conference on Intelligent Robots and Systems. IEEE/RSJ International Conference on Intelligent Robots and Systems 20191101

We present a method that plans motions for a concentric tube robot to automatically reach surgical targets inside the body while avoiding obstacles, where the patient's anatomy is represented by point clouds. Point clouds can be generated intra-operatively via endoscopic instruments, enabling the system to update obstacle representations over time as the patient anatomy changes during surgery. Our new motion planning method uses a combination of sampling-based motion planning methods and local o ...[more]

PMID: 32355572

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Project description:Plant phenotyping is a central task in crop science and plant breeding. It involves measuring plant traits to describe the anatomy and physiology of plants and is used for deriving traits and evaluating plant performance. Traditional methods for phenotyping are often time-consuming operations involving substantial manual labor. The availability of 3D sensor data of plants obtained from laser scanners or modern depth cameras offers the potential to automate several of these phenotyping tasks. This automation can scale up the phenotyping measurements and evaluations that have to be performed to a larger number of plant samples and at a finer spatial and temporal resolution. In this paper, we investigate the problem of registering 3D point clouds of the plants over time and space. This means that we determine correspondences between point clouds of plants taken at different points in time and register them using a new, non-rigid registration approach. This approach has the potential to form the backbone for phenotyping applications aimed at tracking the traits of plants over time. The registration task involves finding data associations between measurements taken at different times while the plants grow and change their appearance, allowing 3D models taken at different points in time to be compared with each other. Registering plants over time is challenging due to its anisotropic growth, changing topology, and non-rigid motion in between the time of the measurements. Thus, we propose a novel approach that first extracts a compact representation of the plant in the form of a skeleton that encodes both topology and semantic information, and then use this skeletal structure to determine correspondences over time and drive the registration process. Through this approach, we can tackle the data association problem for the time-series point cloud data of plants effectively. We tested our approach on different datasets acquired over time and successfully registered the 3D plant point clouds recorded with a laser scanner. We demonstrate that our method allows for developing systems for automated temporal plant-trait analysis by tracking plant traits at an organ level.

Dataset Information

Planning High-Quality Motions for Concentric Tube Robots in Point Clouds via Parallel Sampling and Optimization.

Publications

Planning High-Quality Motions for Concentric Tube Robots in Point Clouds via Parallel Sampling and Optimization.

Similar Datasets

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