Unknown

Dataset Information

0

Longitudinal analyses reveal immunological misfiring in severe COVID-19.


ABSTRACT: Recent studies have provided insights into the pathogenesis of coronavirus disease 2019 (COVID-19)1-4. However, the longitudinal immunological correlates of disease outcome remain unclear. Here we serially analysed immune responses in 113 patients with moderate or severe COVID-19. Immune profiling revealed an overall increase in innate cell lineages, with a concomitant reduction in T cell number. An early elevation in cytokine levels was associated with worse disease outcomes. Following an early increase in cytokines, patients with moderate COVID-19 displayed a progressive reduction in type 1 (antiviral) and type 3 (antifungal) responses. By contrast, patients with severe COVID-19 maintained these elevated responses throughout the course of the disease. Moreover, severe COVID-19 was accompanied by an increase in multiple type 2 (anti-helminths) effectors, including interleukin-5 (IL-5), IL-13, immunoglobulin E and eosinophils. Unsupervised clustering analysis identified four immune signatures, representing growth factors (A), type-2/3 cytokines (B), mixed type-1/2/3 cytokines (C), and chemokines (D) that correlated with three distinct disease trajectories. The immune profiles of patients who recovered from moderate COVID-19 were enriched in tissue reparative growth factor signature A, whereas the profiles of those with who developed severe disease had elevated levels of all four signatures. Thus, we have identified a maladapted immune response profile associated with severe COVID-19 and poor clinical outcome, as well as early immune signatures that correlate with divergent disease trajectories.

SUBMITTER: Lucas C 

PROVIDER: S-EPMC7477538 | biostudies-literature | 2020 Aug

REPOSITORIES: biostudies-literature

altmetric image

Publications

Longitudinal analyses reveal immunological misfiring in severe COVID-19.

Lucas Carolina C   Wong Patrick P   Klein Jon J   Castro Tiago B R TBR   Silva Julio J   Sundaram Maria M   Ellingson Mallory K MK   Mao Tianyang T   Oh Ji Eun JE   Israelow Benjamin B   Takahashi Takehiro T   Tokuyama Maria M   Lu Peiwen P   Venkataraman Arvind A   Park Annsea A   Mohanty Subhasis S   Wang Haowei H   Wyllie Anne L AL   Vogels Chantal B F CBF   Earnest Rebecca R   Lapidus Sarah S   Ott Isabel M IM   Moore Adam J AJ   Muenker M Catherine MC   Fournier John B JB   Campbell Melissa M   Odio Camila D CD   Casanovas-Massana Arnau A   Herbst Roy R   Shaw Albert C AC   Medzhitov Ruslan R   Schulz Wade L WL   Grubaugh Nathan D ND   Dela Cruz Charles C   Farhadian Shelli S   Ko Albert I AI   Omer Saad B SB   Iwasaki Akiko A  

Nature 20200727 7821


Recent studies have provided insights into the pathogenesis of coronavirus disease 2019 (COVID-19)<sup>1-4</sup>. However, the longitudinal immunological correlates of disease outcome remain unclear. Here we serially analysed immune responses in 113 patients with moderate or severe COVID-19. Immune profiling revealed an overall increase in innate cell lineages, with a concomitant reduction in T cell number. An early elevation in cytokine levels was associated with worse disease outcomes. Followi  ...[more]

Similar Datasets

2023-05-11 | GSE227080 | GEO
2023-04-21 | GSE226206 | GEO
2024-05-24 | PXD024087 | Pride
| S-BSST416 | biostudies-other
2022-10-19 | GSE182123 | GEO
| S-SCDT-EMM-2020-13038 | biostudies-other
2023-03-06 | PXD040438 | Pride
2021-01-15 | GSE164805 | GEO
2022-12-06 | E-MTAB-12392 | biostudies-arrayexpress
| S-EPMC7689306 | biostudies-literature