Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Draft Genome Sequence of Brucella ceti Isolated in the Western Pacific Ocean.

ABSTRACT: In 2018, Brucella ceti was isolated from a bottlenose dolphin from the western Pacific Ocean. Here, we report a draft genome sequence of the isolate BD1442 of sequence type 27, which is the only sequence type known to have been isolated from human clinical cases.

SUBMITTER: Ueno Y

PROVIDER: S-EPMC7516157 | biostudies-literature | 2020 Sep

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Draft Genome Sequence of Brucella ceti Isolated in the Western Pacific Ocean.

Ueno Yuichi Y Kumagai Masahiko M Kanamori Hiroyuki H Yanagisawa Makio M Kino Sayuri S Shigeno Satoru S Osaki Makoto M Takamatsu Daisuke D Katsuda Ken K Maruyama Tadashi T Ohishi Kazue K

Microbiology resource announcements 20200924 39

In 2018, <i>Brucella ceti</i> was isolated from a bottlenose dolphin from the western Pacific Ocean. Here, we report a draft genome sequence of the isolate BD1442 of sequence type 27, which is the only sequence type known to have been isolated from human clinical cases. ...[more]

PMID: 32972946

Similar Datasets

Draft Whole-Genome Sequence of Triparma laevis f. inornata (Parmales, Bolidophyceae), Isolated from the Oyashio Region, Western North Pacific Ocean.

Project description:We present the first draft whole-genome sequence for the Parmales (Bolidophyceae, Heterokonta), a picoplanktonic sister group of diatoms, using a Triparma laevis f. inornata strain that was isolated from the Oyashio region in the western North Pacific Ocean.

| S-EPMC7427184 | biostudies-literature

Molecular characterization of Brucella ceti from a bottlenose dolphin (Tursiops truncatus) with osteomyelitis in the western Pacific.

Project description:Although the presence of Brucella spp. in the western Pacific has been suggested by epidemiological studies on cetaceans, it has not been confirmed by bacterial isolation. Here, for the first time, we report that a marine Brucella strain was isolated in the western Pacific from a bottlenose dolphin with osteomyelitis. The isolate from the lesion was confirmed to be B. ceti of sequence type 27 by multilocus sequence typing and Bruce-ladder PCR. Infrequent-restriction-site PCR and omp2 gene sequencing revealed that molecular characteristics of this isolate were similar to those of Brucella DNA previously detected from minke whales in the western North Pacific. These results suggest that genetically related Brucella strains circulate in cetacean species in this region.

| S-EPMC7324819 | biostudies-literature

Draft Genome Sequence of Brucella abortus BCB027, a Strain Isolated from a Domestic Deer.

Project description:Many Brucella species are isolated from nonpreferred hosts, and these bacteria may show genetic differences from isolates from the preferred hosts. Here, we report the draft genome sequence of Brucella abortus BCB027, a novel strain isolated from a domestic deer.

| S-EPMC3569276 | biostudies-literature

Complete Genome Sequence of a Brucella ceti ST26 Strain Isolated from a Striped Dolphin (Stenella coeruleoalba) on the Coast of Italy.

Project description:Brucella spp. are important pathogens affecting a wide range of terrestrial and aquatic animals. We report the complete and annotated genome sequence of Brucella ceti ST26 strain TE10759-12, isolated from a striped dolphin (Stenella coeruleoalba) stranded along the Italian shoreline in March of 2012.

| S-EPMC3945494 | biostudies-literature

Draft Genome Sequences of Brucella suis Biovar 4 Strain NCTC 10385, Brucella ceti Strain NCTC 12891T, Brucella inopinata Strain CAMP 6436T, and Brucella neotomae Strain ATCC 23459T.

Project description:With the aim of developing quantitative PCR methods for the detection and differentiation of Brucella species, the genomes of Brucella ceti, Brucella inopinata, Brucella netotomae, and Brucella suis biovar 4 were sequenced and analyzed.

| S-EPMC4183862 | biostudies-literature

Complete Genome Sequence of <i>Cellulomonas</i> sp. Strain C5510, Isolated from Pacific Ocean Seawater.

Project description:We report the complete genome sequence of Cellulomonas sp. strain C5510, obtained by Oxford Nanopore and Illumina sequencing. The approximately 4.15-Mb genome sequence consists of one circular chromosome and one circular plasmid, with an overall G+C content of 74.9%.

| S-EPMC8772446 | biostudies-literature

Brucella ceti and Brucella pinnipedialis genome characterization unveils genetic features that highlight their zoonotic potential.

Project description:The Gram-negative bacteria Brucella ceti and Brucella pinnipedialis circulate in marine environments primarily infecting marine mammals, where they cause an often-fatal disease named brucellosis. The increase of brucellosis among several species of cetaceans and pinnipeds, together with the report of sporadic human infections, raises concerns about the zoonotic potential of these pathogens on a large scale and may pose a threat to coastal communities worldwide. Therefore, the characterization of the B. ceti and B. pinnipedialis genetic features is a priority to better understand the pathological factors that may impact global health. Moreover, an in-depth functional analysis of the B. ceti and B. pinnipedialis genome in the context of virulence and pathogenesis was not undertaken so far. Within this picture, here we present the comparative whole-genome characterization of all B. ceti and B. pinnipedialis genomes available in public resources, uncovering a collection of genetic tools possessed by these aquatic bacterial species compared to their zoonotic terrestrial relatives. We show that B. ceti and B. pinnipedialis genomes display a wide host-range infection capability and a polyphyletic phylogeny within the genus, showing a genomic structure that fits the canonical definition of closeness. Functional genome annotation led to identifying genes related to several pathways involved in mechanisms of infection, others conferring pan-susceptibility to antimicrobials and a set of virulence genes that highlight the similarity of B. ceti and B. pinnipedialis genotypes to those of Brucella spp. displaying human-infecting phenotypes.

| S-EPMC9597259 | biostudies-literature

Complete Genome Sequence of Halomonas meridiana Strain Eplume2, Isolated from a Hydrothermal Plume in the Northeast Pacific Ocean.

Project description:Halomonas meridiana strain Eplume2 (ATCC BAA-804) is a Gram-negative bacterium isolated from hydrothermal plume seawater in the Northeast Pacific Ocean at a depth of 2,000 m. Here, we report the complete genome sequence of this strain, which has a total size of 4.12 Mbp and a 56.6% G+C content.

| S-EPMC7225540 | biostudies-literature

Whole-Genome Sequence of Weissella ceti Strain WS08, Isolated from Diseased Rainbow Trout in Brazil.

Project description:We report here the complete genome sequence of Weissella ceti strain WS08, an emerging pathogen to farm-raised rainbow trout. The genome of strain WS08 is composed of a circular chromosome with 1,355,853 bp and a G+C content of 40.78%.

| S-EPMC4153489 | biostudies-literature

Draft Genome Sequences of Two Bacterial Strains, Muricauda sp. 72 and NH166, Isolated from the South China Sea and West Pacific Ocean.

Project description:Here, we report the whole-genome sequences of two bacterial strains, Muricauda sp. 72 and NH166, isolated from the South China Sea and West Pacific Ocean, respectively. These two strains may represent a novel species of the genus Muricauda, and the features of their genome sequences will enrich our understandings of strains in the genus Muricauda.

| S-EPMC6953513 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data