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Insights into the l,d-Transpeptidases and d,d-Carboxypeptidase of Mycobacterium abscessus: Ceftaroline, Imipenem, and Novel Diazabicyclooctane Inhibitors.


ABSTRACT: Mycobacterium abscessus is a highly drug-resistant nontuberculous mycobacterium (NTM). Efforts to discover new treatments for M. abscessus infections are accelerating, with a focus on cell wall synthesis proteins (M. abscessus l,d-transpeptidases 1 to 5 [LdtMab1 to LdtMab5] and d,d-carboxypeptidase) that are targeted by ?-lactam antibiotics. A challenge to this approach is the presence of chromosomally encoded ?-lactamase (BlaMab). Using a mechanism-based approach, we found that a novel ceftaroline-imipenem combination effectively lowered the MICs of M. abscessus isolates (MIC50 ? 0.25 ?g/ml; MIC90 ? 0.5 ?g/ml). Combining ceftaroline and imipenem with a ?-lactamase inhibitor, i.e., relebactam or avibactam, demonstrated only a modest effect on susceptibility compared to each of the ?-lactams alone. In steady-state kinetic assays, BlaMab exhibited a lower Ki ?app (0.30?±?0.03??M for avibactam and 136?±?14??M for relebactam) and a higher acylation rate for avibactam (k 2/K?=?3.4 × 105 ± 0.4 × 105 M-1 s-1 for avibactam and 6 × 102 ± 0.6 × 102 M-1 s-1 for relebactam). The k cat/Km was nearly 10-fold lower for ceftaroline fosamil (0.007?±?0.001??M-1 s-1) than for imipenem (0.056?±?0.006??M-1 s-1). Timed mass spectrometry captured complexes of avibactam and BlaMab, LdtMab1, LdtMab2, LdtMab4, and d,d-carboxypeptidase, whereas relebactam bound only BlaMab, LdtMab1, and LdtMab2 Interestingly, LdtMab1, LdtMab2, LdtMab4, LdtMab5, and d,d-carboxypeptidase bound only to imipenem when incubated with imipenem and ceftaroline fosamil. We next determined the binding constants of imipenem and ceftaroline fosamil for LdtMab1, LdtMab2, LdtMab4, and LdtMab5 and showed that imipenem bound?>100-fold more avidly than ceftaroline fosamil to LdtMab1 and LdtMab2 (e.g., Ki ?app or Km of LdtMab1?=?0.01?±?0.01??M for imipenem versus 0.73?±?0.08??M for ceftaroline fosamil). Molecular modeling indicates that LdtMab2 readily accommodates imipenem, but the active site must widen to??8 Å for ceftaroline to enter. Our analysis demonstrates that ceftaroline and imipenem binding to multiple targets (l,d-transpeptidases and d,d-carboxypeptidase) and provides a mechanistic rationale for the effectiveness of this dual ?-lactam combination in M. abscessus infections.

SUBMITTER: Dousa KM 

PROVIDER: S-EPMC7526840 | biostudies-literature | 2020 Jul

REPOSITORIES: biostudies-literature

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Insights into the l,d-Transpeptidases and d,d-Carboxypeptidase of Mycobacterium abscessus: Ceftaroline, Imipenem, and Novel Diazabicyclooctane Inhibitors.

Dousa Khalid M KM   Kurz Sebastian G SG   Taracila Magdalena A MA   Bonfield Tracey T   Bethel Christopher R CR   Barnes Melissa D MD   Selvaraju Suresh S   Abdelhamed Ayman M AM   Kreiswirth Barry N BN   Boom W Henry WH   Kasperbauer Shannon H SH   Daley Charles L CL   Bonomo Robert A RA  

Antimicrobial agents and chemotherapy 20200722 8


<i>Mycobacterium abscessus</i> is a highly drug-resistant nontuberculous mycobacterium (NTM). Efforts to discover new treatments for <i>M. abscessus</i> infections are accelerating, with a focus on cell wall synthesis proteins (<i>M. abscessus</i> l,d-transpeptidases 1 to 5 [Ldt<sub>Mab1</sub> to Ldt<sub>Mab5</sub>] and d,d-carboxypeptidase) that are targeted by β-lactam antibiotics. A challenge to this approach is the presence of chromosomally encoded β-lactamase (Bla<sub>Mab</sub>). Using a me  ...[more]

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