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Next-generation sequencing yields the complete chloroplast genome of Pleione chunii, a vulnerable orchid in China.

ABSTRACT: Pleione chunii is a vulnerable epiphytic orchid with significant ornamental value. Here, we report the first complete chloroplast genome of P. chunii. The circular genome was 158,880?bp in length and consisted of a pair of inverted repeats (IR 26,465?bp), which were separated by a large single copy region (LSC 87,259?bp) and a small single copy region (SSC 18,691?bp). It contained 115 unique genes, including 87 protein-coding genes, 38 tRNAs, and eight rRNAs. The maximum-likelihood phylogenetic analysis indicated that P. chunii was sister to P. bulbocodioides and P. formosana.

SUBMITTER: Wu SS

PROVIDER: S-EPMC7706524 | biostudies-literature | 2019 Jul

REPOSITORIES: biostudies-literature

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Next-generation sequencing yields the complete chloroplast genome of Pleione chunii, a vulnerable orchid in China.

Wu Sha-Sha SS Shen Li-Ming LM Ling Rui R Dai Zhong-Wu ZW Liu Zhong-Jian ZJ Lan Si-Ren SR

Mitochondrial DNA. Part B, Resources 20190716 2

Pleione chunii is a vulnerable epiphytic orchid with significant ornamental value. Here, we report the first complete chloroplast genome of P. chunii. The circular genome was 158,880 bp in length and consisted of a pair of inverted repeats (IR 26,465 bp), which were separated by a large single copy region (LSC 87,259 bp) and a small single copy region (SSC 18,691 bp). It contained 115 unique genes, including 87 protein-coding genes, 38 tRNAs, and eight rRNAs. The maximum-likelihood ...[more]

PMID: 33365633

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