Dataset Information

Pharmacogenomics landscape of COVID-19 therapy response in Serbian population and comparison with worldwide populations.

ABSTRACT:

Background

Since there are no certified therapeutics to treat COVID-19 patients, drug repurposing became important. With lack of time to test individual pharmacogenomics markers, population pharmacogenomics could be helpful in predicting a higher risk of developing adverse reactions and treatment failure in COVID-19 patients. Aim of our study was to identify pharmacogenes and pharmacogenomics markers associated with drugs recommended for COVID-19 treatment, chloroquine/hydroxychloroquine, azithromycin, lopinavir and ritonavir, in population of Serbia and other world populations.

Methods

Genotype information of 143 individuals of Serbian origin was extracted from database previously obtained using TruSight One Gene Panel (Illumina). Genotype data of individuals from different world populations were extracted from the 1000 Genome Project. Fisher's exact test was used for comparison of allele frequencies.

Results

We have identified 11 potential pharmacogenomics markers in 7 pharmacogenes relevant for COVID-19 treatment. Based on high alternative allele frequencies in population and the functional effect of the variants, ABCB1 rs1045642 and rs2032582 could be relevant for reduced clearance of azithromycin, lopinavir and ritonavir drugs and UGT1A7 rs17868323 for hyperbilirubinemia in ritonavir treated COVID-19 patients in Serbian population. SLCO1B1 rs4149056 is a potential marker of lopinavir response, especially in Italian population. Our results confirmed that pharmacogenomics profile of African population is different from the rest of the world.

Conclusions

Considering population specific pharmacogenomics landscape, preemptive testing for pharmacogenes relevant for drugs used in COVID-19 treatment could contribute to better understanding of the inconsistency in therapy response and could be applied to improve the outcome of the COVID-19 patients.

SUBMITTER: Stankovic B

PROVIDER: S-EPMC7710379 | biostudies-literature | 2020 Oct

REPOSITORIES: biostudies-literature

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Publications

Pharmacogenomics landscape of COVID-19 therapy response in Serbian population and comparison with worldwide populations.

Stanković Biljana B Kotur Nikola N Gašić Vladimir V Klaassen Kristel K Ristivojević Bojan B Stojiljković Maja M Pavlović Sonja S Zukić Branka B

Journal of medical biochemistry 20201001 4

<h4>Background</h4>Since there are no certified therapeutics to treat COVID-19 patients, drug repurposing became important. With lack of time to test individual pharmacogenomics markers, population pharmacogenomics could be helpful in predicting a higher risk of developing adverse reactions and treatment failure in COVID-19 patients. Aim of our study was to identify pharmacogenes and pharmacogenomics markers associated with drugs recommended for COVID-19 treatment, chloroquine/hydroxychloroquine ...[more]

PMID: 33312066

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Dataset Information

Pharmacogenomics landscape of COVID-19 therapy response in Serbian population and comparison with worldwide populations.

Background

Methods

Results

Conclusions

Publications

Pharmacogenomics landscape of COVID-19 therapy response in Serbian population and comparison with worldwide populations.

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