Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Draft Genome Sequence of a Novel Methylobacterium brachiatum Strain Isolated from Human Skin.

ABSTRACT: Methylobacterium brachiatum MBRA is an aerobic alphaproteobacterium isolated from the human skin on methanol-containing minimal medium. The genome was sequenced using Illumina and Nanopore technology, and the genome was assembled using Unicycler. M. brachiatum MBRA possesses two xoxF genes, one gene pair, mxaF and mxaI, and a complete serine pathway.

SUBMITTER: Cremers G

PROVIDER: S-EPMC7729408 | biostudies-literature | 2020 Dec

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Draft Genome Sequence of a Novel Methylobacterium brachiatum Strain Isolated from Human Skin.

Cremers Geert G Kenyon Angelique A Gubbels Niels N Jansen Matthijs M van Alen Theo A TA Berben Tom T Op den Camp Huub J M HJM

Microbiology resource announcements 20201210 50

Methylobacterium brachiatum MBRA is an aerobic alphaproteobacterium isolated from the human skin on methanol-containing minimal medium. The genome was sequenced using Illumina and Nanopore technology, and the genome was assembled using Unicycler. M. brachiatum MBRA possesses two xoxF genes, one gene pair, mxaF and mxaI, and a complete serine pathway. ...[more]

PMID: 33303660

Similar Datasets

Draft Genome Sequence of Methylobacterium mesophilicum Strain SR1.6/6, Isolated from Citrus sinensis.

Project description:Methylobacterium mesophilicum strain SR1.6/6 is an endophytic bacterium isolated from a surface-sterilized Citrus sinensis branch. Ecological and biotechnological aspects of this bacterium, such as the genes involved in its association with the host plant and the primary oxidation of methanol, were annotated in the draft genome.

| S-EPMC3707593 | biostudies-literature

Draft Genome Sequence of Streptomyces mexicanus Strain Q0842, Isolated from Human Skin.

Project description:In 2003, Streptomyces mexicanus was reported as a novel xylanolytic bacterial species isolated from soil; a partial genome sequence was determined. In 2019, a strain from the same species was isolated from a hand skin swab sample from a healthy French woman. Genome sequencing revealed an 8,011,832-bp sequence with a GC content of 72.5%.

| S-EPMC7595954 | biostudies-literature

Draft Genome Sequence of Kytococcus schroeteri Strain H01, Isolated from Human Skin.

Project description:Kytococcus schroeteri strain H01 was isolated from the skin of a healthy volunteer who underwent erythromycin treatment for a skin disorder 1 year prior. The draft genome consists of 2.38 Mb, a G+C content of 73.06%, and 2,221 protein coding sequences. This is the first genome characterization of a K. schroeteri strain isolated from human skin.

| S-EPMC6776787 | biostudies-literature

Draft Genome Sequence of the Psychrotolerant Bacterium Methylobacterium sp. Strain BTF04, Isolated from Freshwater in Antarctica.

Project description:Methylobacterium sp. strain BTF04, a pink-pigmented psychrotolerant bacterium, was isolated from freshwater on Barton Peninsula, King George Island, Antarctica. Here, we report the assembled draft genome sequence of Methylobacterium sp. strain BTF04.

| S-EPMC7242663 | biostudies-literature

Draft Genome Sequence of Methylobacterium sp. Strain V23, Isolated from Accretion Ice of the Antarctic Subglacial Lake Vostok.

Project description:Here, we report the draft genome sequence of Methylobacterium sp. strain V23, a bacterium isolated from accretion ice of the subglacial Lake Vostok (3,592 meters below the surface). This genome makes possible the study of ancient and psychrophilic genes and proteins from a subglacial environment isolated from the surface for at least 15 million years.

| S-EPMC5843734 | biostudies-literature

Draft Genome Sequence of Methylobacterium radiotolerans, a DDE-Degrading and Plant Growth-Promoting Strain Isolated from Cucurbita pepo.

Project description:We announce the draft genome of Methylobacterium radiotolerans, a Gram-negative bacterium isolated from Cucurbita pepo roots. This strain shows 2,2-bis(p-chlorophenyl)-1,1-dichloroethylene (DDE)-degrading potential and plant growth-promoting capacities. Analyses of its 6.8-Mb genome will improve our understanding of DDE-degradation pathways and aid in the deployment of phytoremediation technologies to remediate DDE-contaminated soils.

| S-EPMC4432354 | biostudies-literature

Draft Genome Sequence of a New Staphylococcal Species Isolated from Human Skin.

Project description:A hemolytic staphylococcal strain, Staphylococcus sp. strain 170179, was isolated from healthy human skin. Genome sequencing and comparison of strain 170179 to other staphylococci revealed a relatedness to Staphylococcus haemolyticus with an average nucleotide identity of 87.5%, indicating that Staphylococcus sp. 170179 belongs to a separate species.

| S-EPMC7005121 | biostudies-literature

Draft Genome Sequence of Ochroconis constricta UM 578, Isolated from Human Skin Scraping.

Project description:Ochroconis constricta is a soilborne dematiaceous fungus that has never been reported to be associated with human infection. Here we report the first draft genome sequence of strain UM 578, isolated from human skin scraping. The genomic information revealed will contribute to a better understanding of this species.

| S-EPMC3990737 | biostudies-literature

Draft Genome Sequence of Lactobacillus hominis Strain CRBIP 24.179T, Isolated from Human Intestine.

Project description:We report the draft genome sequence of the strain Lactobacillus hominis CRBIP 24.179(T), isolated from a human clinical sample. The total length of the 28 contigs is about 1.9 Mb, with a G+C content of 37% and 1,983 coding sequences.

| S-EPMC3751617 | biostudies-other

Complete Genome Sequence of Methylobacterium aquaticum Strain 22A, Isolated from Racomitrium japonicum Moss.

Project description:Methylobacterium species colonize plant surfaces and utilize methanol emitted from plants. Methylobacterium aquaticum strain 22A was isolated from a hydroponic culture of a moss, Racomitrium japonicum, and is a potent plant growth promoter. The complete genome sequencing of the strain confirmed the presence of genes related to plant growth promotion and methylotrophy.

| S-EPMC4392154 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data