Ontology highlight
ABSTRACT:
SUBMITTER: Pattabiraman C
PROVIDER: S-EPMC7746284 | biostudies-literature | 2020
REPOSITORIES: biostudies-literature
Pattabiraman Chitra C Habib Farhat F P K Harsha H Rasheed Risha R Prasad Pramada P Reddy Vijayalakshmi V Dinesh Prameela P Damodar Tina T Hosallimath Kiran K George Anson K AK Kiran Reddy Nakka Vijay NV John Banerjee B Pattanaik Amrita A Kumar Narendra N Mani Reeta S RS Venkataswamy Manjunatha M MM Shahul Hameed Shafeeq K SK Kumar B G Prakash P Desai Anita A Vasanthapuram Ravi R
PloS one 20201217 12
Karnataka, a state in south India, reported its first case of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) infection on March 8, 2020, more than a month after the first case was reported in India. We used a combination of contact tracing and genomic epidemiology to trace the spread of SARS-CoV-2 in the state up until May 21, 2020 (1578 cases). We obtained 91 genomes of SARS-CoV-2 which clustered into seven lineages (Pangolin lineages-A, B, B.1, B.1.80, B.1.1, B.4, and B.6). The l ...[more]