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Characterization of the complete chloroplast genome of Ottelia alismoides (Hydrocharitaceae), a vulnerable submerged macrophyte in China.

ABSTRACT: Ottelia alismoides (Linn.) Pers. (Hydrocharitaceae) is an endangered submerged macrophyte in China. In his study, we assembled complete chloroplast (cp) genome of O. alismoides based on the Illumina reads. The cp genome of O. alismoides was 157,885 bp in length, including a large single copy (LSC) region of 87,707 bp and small single copy (SSC) region of 20,234 bp, separated by two inverted repeat (IR) regions of 24,972 bp each. The cp genome encoded 115 genes including 70 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The GC content of cp genome of O. alismoides is 36.6%. A maximum likelihood phylogenetic analysis revealed that O. alismoides is closely related to O. acuminate var. songmingensis.

SUBMITTER: Guo JL

PROVIDER: S-EPMC7748839 | biostudies-literature | 2020 Jan

REPOSITORIES: biostudies-literature

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Characterization of the complete chloroplast genome of Ottelia alismoides (Hydrocharitaceae), a vulnerable submerged macrophyte in China.

Guo Jian-Ling JL Yu Yan-Hong YH Zhang Yong-Hong YH

Mitochondrial DNA. Part B, Resources 20200121 1

Ottelia alismoides (Linn.) Pers. (Hydrocharitaceae) is an endangered submerged macrophyte in China. In his study, we assembled complete chloroplast (cp) genome of O. alismoides based on the Illumina reads. The cp genome of O. alismoides was 157,885 bp in length, including a large single copy (LSC) region of 87,707 bp and small single copy (SSC) region of 20,234 bp, separated by two inverted repeat (IR) regions of 24,972 bp each. The cp genome encoded 115 genes including 70 p ...[more]

PMID: 33366577

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Project description:Background and aimsOttelia alismoides (Hydrocharitaceae) is a freshwater macrophyte that, unusually, possesses three different CO2-concentrating mechanisms. Here we describe its leaf anatomy and chloroplast ultrastructure, how these are altered by CO2 concentration and how they may underlie C4 photosynthesis.MethodsLight and transmission electron microscopy were used to study the anatomy of mature leaves of O. alismoides grown at high and low CO2 concentrations. Diel acid change and the activity of phosphoenolpyruvate carboxylase were measured to confirm that CAM activity and C4 photosynthesis were present.Key resultsWhen O. alismoides was grown at low CO2, the leaves performed both C4 and CAM photosynthesis whereas at high CO2 leaves used C4 photosynthesis. The leaf comprised an upper and lower layer of epidermal cells separated by a large air space occupying about 22 % of the leaf transverse-section area, and by mesophyll cells connecting the two epidermal layers. Kranz anatomy was absent. At low CO2, chloroplasts in the mesophyll cells were filled with starch even at the start of the photoperiod, while epidermal chloroplasts contained small starch grains. The number of chloroplasts in the epidermis was greater than in the mesophyll cells. At high CO2, the structure was unchanged but the thicknesses of the two epidermal layers, the air space, mesophyll and the transverse-section area of cells and air space were greater.ConclusionsLeaves of O. alismoides have epidermal and mesophyll cells that contain chloroplasts and large air spaces but lack Kranz anatomy. The high starch content of mesophyll cells suggests they may benefit from an internal source of CO2, for example via C4 metabolism, and are also sites of starch storage. The air spaces may help in the recycling of decarboxylated or respired CO2. The structural similarity of leaves at low and high CO2 is consistent with the constitutive nature of bicarbonate and C4 photosynthesis. There is sufficient structural diversity within the leaf of O. alismoides to support dual-cell C4 photosynthesis even though Kranz anatomy is absent.

Dataset Information

Characterization of the complete chloroplast genome of Ottelia alismoides (Hydrocharitaceae), a vulnerable submerged macrophyte in China.

Publications

Characterization of the complete chloroplast genome of <i>Ottelia alismoides</i> (Hydrocharitaceae), a vulnerable submerged macrophyte in China.

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