Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Characterization of the mitochondrial genome of Eutomostethus vegetus Konow, 1898 (Hymenoptera: Tenthredinidae) and phylogenetic analysis.

ABSTRACT: The nearly complete mitochondrial genome of Eutomostethus vegetus Konow, 1898 was high-quality assembled. Several gene rearrangement events were observed in IQM gene cluster by comparing with the inferred insect ancestral mitochondrial genome. Phylogenetic analysis demonstrated the position of Eutomostethus vegetus in the Tenthredinidae and showed that Blennocampinae is a sister group to Fenusinae.

SUBMITTER: Li Y

PROVIDER: S-EPMC7783146 | biostudies-literature | 2020 Jul

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Characterization of the mitochondrial genome of Eutomostethus vegetus Konow, 1898 (Hymenoptera: Tenthredinidae) and phylogenetic analysis.

Li Ya Y Wei Meicai M Liu Jiafen J Niu Gengyun G

Mitochondrial DNA. Part B, Resources 20200728 3

The nearly complete mitochondrial genome of Eutomostethus vegetus Konow, 1898 was high-quality assembled. Several gene rearrangement events were observed in IQM gene cluster by comparing with the inferred insect ancestral mitochondrial genome. Phylogenetic analysis demonstrated the position of Eutomostethus vegetus in the Tenthredinidae and showed that Blennocampinae is a sister group to Fenusinae. ...[more]

PMID: 33458046

Similar Datasets

The complete mitochondrial genome of Athalia proxima (Hymenoptera: Tenthredinidae) and phylogenetic analysis.

Project description:The nearly complete mitochondrial genome of Athalia proxima is 15852 bp in size, containing 13 protein-coding genes, 22 transfer RNAs, 2 ribosomal RNAs, and a partial control region. Compared to ancestral organization, seven tRNA genes were rearranged. Bayesian and maximum-likelihood trees recovered the monophyly of Tenthredinidae and A. proxima was the basal lineage. The mitogenome sequence provided fundamental data for resolving phylogenetic and genetic problems of Tenthredinidae.

| S-EPMC7707687 | biostudies-literature

The complete mitochondrial genome of Hemathlophorus brevigenatus Wei, 2005 (Hymenoptera: Tenthredinidae) with phylogenetic analysis.

Project description:The mitochondrial genome of Hemathlophorus brevigenatus Wei, 2005 collected from Huanggang Mountain of China is described using the NGS approach. The length of the sequence is 15,452 bp containing 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes, and one control region. The overall A + T content is 79.5%. tRNA rearrangements occur in the MQI cluster. Phylogenetic analysis of H. brevigenatus resolved it in a clade with Allantus togatus in Allantinae which provides new evidence for the phylogeny of Tenthredinidae.

| S-EPMC8405070 | biostudies-literature

The nearly complete mitochondrial genome of Colochela zhongi Wei, 2016 (Hymenoptera: Tenthredinidae) and phylogenetic analysis.

Project description:We assembled the near-complete mitochondrial genome of Colochela zhongi Wei, 2016 with next-generation sequencing (NGS). The total genome size of C. zhongi was 15,095 bp with 80.6% A + T content, containing 13 protein-coding genes (PCGs), 22 tRNA genes, and two rRNA genes. Three tRNA genes rearrangements were found compared to the ancestral organization. Phylogenetic analysis results based on heterogeneity models of 46 Symphytan and two Apocritan strongly supported that C. zhongi was closely related to Siobla xizangensis.

| S-EPMC7782538 | biostudies-literature

The complete mitochondrial genome of Taxoblenus sinicus Wei & Nie, 1999 (Hymenoptera: Tenthredinidae) and phylogenetic analysis.

Project description:The complete mitochondrial genome of Taxoblenus sinicus Wei & Nie, 1999 was described. The circular genome is 15,878 bp with an A + T content of 80.4%. It contains 37 genes, and an 859 bp control region. The trnI (+)-trnQ (-)-trnM (+) cluster rearranges to trnM (+)-trnQ (-)-CR-trnI (+). Phylogenetic analysis demonstrates that Allantinae is a sister group of Tenthredininae and T. sinicus is one of the basal lineages of Allantinae.

| S-EPMC8218849 | biostudies-literature

The complete mitochondrial genome sequence of Taxonus zhangi Wei, 1997 (Hymenoptera: Tenthredinidae) with phylogenetic analysis.

Project description:The complete mitochondrial genome of Taxonus zhangi was 16,002 bp in size, comprises 13 protein-coding genes (PCGs), two rRNA genes, 22 tRNA genes, and large non-coding A + T region. The phylogenetic result confirms the monophyly of Taxonina and Allantina, and also supports that Xenapateini is the sister group of Allantini which is composed of Taxonina and Allantina.

| S-EPMC8519519 | biostudies-literature

Nearly complete mitochondrial genome of Siobla xizangensis Xiao, Huang & Zhou, 1988 (Hymenoptera: Tenthredinidae) and phylogenetic analysis.

Project description:In this study we review the phylogenetic grouping of the sawfly genus Siobla within the superfamily Tenthredinoidea. Using Next Generation Sequencing (NGS), we describe the complete mitochondrial genome of Siobla xizangensis Xiao, Huang & Zhou, 1988. The assembled mitochondrial genome of S. xizangensis was found to be 15015 bp, with three tRNA genes rearranged compared to the ancestral organization. The overall nucleotide composition was 42.6% for A, 11.4% for C, 7.7% for G and 38.3% for T. The phylogenetic tree based on heterogeneity models of 36 Symphytan and two Apocritan recovered the monophyly of Tenthredinidae, and S. xizangensis was identified as the sister group of Tenthredo.

| S-EPMC7707776 | biostudies-literature

Characterization of the mitochondrial genome of Analcellicampa xanthosoma gen. et sp. nov. (Hymenoptera: Tenthredinidae).

Project description:A new genus with a new species of the tribe Hoplocampini of Hoplocampinae was described from China: Analcellicampa xanthosoma Wei & Niu, gen. et sp. nov. Hoplocampa danfengensis G. Xiao 1994 was designated as the type species of the new genus. The characters of Analcellicampa danfengensis (G. Xiao) comb. nov. were briefly discussed. A key to the tribes and known genera of Hoplocampinae was provided. The nearly complete mitochondrial genome of A. xanthosoma was characterized as having a length of 15,512 bp and containing 37 genes (22 tRNAs, 13 protein-coding genes (PCGs), and 2 rRNAs). The gene order of this new specimen was the same as that in the inferred insect ancestral mitochondrial genome. All PCGs were initiated by ATN codons and ended with TAA or T stop codons. All tRNAs had a typical cloverleaf secondary structure, except for trnS1. Remarkably, the helices H991 of rrnS and H47 of rrnL were redundant, while helix H563 of rrnL was highly conserved. A phylogeny based on previously reported symphytan mitochondrial genomes showed that A. xanthosoma is a sister group to Monocellicampa pruni, with high support values. We suggest that A. xanthosoma and M. pruni belong to the tribe Hoplocampini of Hoplocampinae.

| S-EPMC6500721 | biostudies-literature

Advancement in sequencing the mitochondrial genome of Birmella discoidalisa Wei, 1994 (Hymenoptera: Tenthredinidae) and the phylogenetic classification of Fenusini.

Project description:The nearly complete mitochondrial genome of Birmella discoidalisa Wei, 1994 has been sequenced and the genome was revised with more comprehensively sequenced to near completion. The new mitogenome sequences were constructed using two separate assembly approaches, both yielding consistent results. Compared with the sequence previously reported (MF197548.1), the trnI (+) and trnQ (-) genes were assembled, and the trnI (+)-trnQ (-) genes were rearranged compared with the ancestral type. The systematic classification of B. discoidalisa was examined to provide a basis for allocation into Tenthredinidae phylogeny.

| S-EPMC7707670 | biostudies-literature

The complete mitochondrial genome of a sawfly species, Analcellicampa danfengensis (Hymenoptera: Tenthredinidae).

Project description:The complete mitochondrial genome of the sawfly, Analcellicampa danfengensis, was sequenced and analyzed. This double strand, circular molecule is 15,968 bp in length with an A + T content of 80.9% and contains 13 PCGs, 22 tRNA genes, and two rRNA genes. Gene rearrangement occurs in the mitogenome of A. danfengensis. Two putative control regions are found, respectively with a length of 495 bp and 359 bp. All PCGs use standard ATN as start codons and most PCGs has complete TAN as stop codons. The phylogenetic analysis suggests that A. danfengensis is closely related to Monocellicampa pruni, another species of Tenthredinidae.

| S-EPMC7706906 | biostudies-literature

Characterization of Complete Mitochondrial Genome and Phylogenetic Analysis of a Nocturnal Wasps-Provespa barthelemyi (Hymenoptera: Vespidae).

Project description:Genus Provespa contains nocturnal wasps mainly found in the southeastern region of Asia. There are no complete genome resources available of this genus, which hinders the study of its phylogenetic evolution and the origin of nocturnal behavior in the Vespidae family. Through high-throughput sequencing, we obtained the mitochondrial genome of Provespa barthelemyi (Hymenoptera: Vespidae), which is 17,721 base pairs in length and contains 13 protein-coding genes (PCGs), 22 tRNAs, and two rRNAs. We identified four gene rearrangement events of P. barthelemyi that frequently occur in the Vespidae family. We used Maximum Likelihood (ML) methodologies to construct a phylogenetic tree based on the sequenced mitochondrial genome and the available data of reported species belonging to Vespinae. Our findings confirmed the monophyly of Vespinae. Our study reports the first complete mitochondrial genome of Provespa and compares its characteristics with other mitochondrial genomes in the family Vespidae. This research should shed light on the phylogenetic relationships and ecological characteristics of the Vespidae family.

| S-EPMC10742571 | biostudies-literature