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The complete chloroplast genome of Caltha Palustris (Ranunculaceae).

ABSTRACT: The complete chloroplast genome sequence of Caltha palustris, a species of the Ranunculaceae family, was characterized from the de novo assembly of HiSeq (Illumina Co.) paired-end sequencing data. The chloroplast genome of C. palustris was 155,292?bp in length, with a large single-copy (LSC) region of 84,120?bp, a small single-copy (SSC) region of 18,342?bp, and a pair of identical inverted repeat regions (IRs) of 26,415?bp. The genome contained a total of 114 genes, including 80 protein-coding genes, 30 transfer RNA (tRNA) genes, and 4 ribosomal RNA (rRNA) genes. The phylogenetic analysis of C. palustris with 14 related species revealed the closest taxonomical relationship with Hydrastis canadensis in the Ranunculaceae family.

SUBMITTER: Lee J

PROVIDER: S-EPMC7799707 | biostudies-literature | 2018 Oct

REPOSITORIES: biostudies-literature

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The complete chloroplast genome of Caltha Palustris (Ranunculaceae).

Lee Junki J Kim Yoojin Y Chun Hyang Sook HS Kwon Kisung K Koh Youngho Y Kang Tae Sun TS Kang Jung-Hwa JH Kim Eun-Jeong EJ Nah Gyoungju G

Mitochondrial DNA. Part B, Resources 20181003 2

The complete chloroplast genome sequence of Caltha palustris, a species of the Ranunculaceae family, was characterized from the de novo assembly of HiSeq (Illumina Co.) paired-end sequencing data. The chloroplast genome of C. palustris was 155,292 bp in length, with a large single-copy (LSC) region of 84,120 bp, a small single-copy (SSC) region of 18,342 bp, and a pair of identical inverted repeat regions (IRs) of 26,415 bp. The genome contained a total of 114 genes, ...[more]

PMID: 33474427

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