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The complete chloroplast genome sequences of little millet (Panicum sumatrense Roth ex Roem. and Schult.) (Poaceae).


ABSTRACT: Little millet, Panicum sumatrense Roth ex Roem. & Schult., is an important cultivated species under the tribe Paniceae, sub-family Panicoideae and family Poaceae. In this study, for the first time we sequenced the complete chloroplast (cp) genome of P. sumatrense to investigate their phylogenetic relationship in the family Poaceae. The complete cp genome sequence of P. sumatrense is 139,384?bp in length with 38.6% overall GC content and exhibits a typical quadripartite structure comprising one pair of inverted repeats (22,723?bp) separated by a small single-copy region (12,583?bp) and a large single-copy region (81,355?bp). The P. sumatrense cp genome encodes 125 unique genes, which include 91 protein-coding genes, 4 rRNA genes, 30 tRNA genes, and 20 genes were duplicated in the inverted repeat region. This newly determined cp genome (P. sumatrense) could be valuable information for the breeding programs of this cereal crops in the family Poaceae.

SUBMITTER: Sebastin R 

PROVIDER: S-EPMC7800850 | biostudies-literature | 2018 Jun

REPOSITORIES: biostudies-literature

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The complete chloroplast genome sequences of little millet (<i>Panicum sumatrense</i> Roth ex Roem. and Schult.) (Poaceae).

Sebastin Raveendar R   Lee Gi-An GA   Lee Kyung Jun KJ   Shin Myoung-Jae MJ   Cho Gyu-Taek GT   Lee Jung-Ro JR   Ma Kyung-Ho KH   Chung Jong-Wook JW  

Mitochondrial DNA. Part B, Resources 20180626 2


Little millet, <i>Panicum sumatrense</i> Roth ex Roem. & Schult., is an important cultivated species under the tribe Paniceae, sub-family Panicoideae and family Poaceae. In this study, for the first time we sequenced the complete chloroplast (cp) genome of <i>P. sumatrense</i> to investigate their phylogenetic relationship in the family Poaceae. The complete cp genome sequence of <i>P. sumatrense</i> is 139,384 bp in length with 38.6% overall GC content and exhibits a typical quadripartite struc  ...[more]

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