Browse
Submit Data
Databases
API
Help

Dataset Information

22 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Complete Genome Sequence of Rhizobium phaseoli Podophage Palo.

ABSTRACT: Here, we present the genome of Palo, a T7-like podophage of Rhizobium phaseoli The genome is 46.3?kb and contains 58 predicted protein-coding genes, including a novel signal-anchor-release (SAR) endolysin, a homolog of the T5 A1 protein required for DNA transfer, and a dual-start holin/antiholin pair.

SUBMITTER: Nabhani A

PROVIDER: S-EPMC7844081 | biostudies-literature | 2021 Jan

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Complete Genome Sequence of Rhizobium phaseoli Podophage Palo.

Nabhani Ali A Rushing Leika L Newkirk Heather H Burrowes Ben B Young Ryland R Gonzalez Carlos C

Microbiology resource announcements 20210128 4

Here, we present the genome of Palo, a T7-like podophage of <i>Rhizobium phaseoli</i> The genome is 46.3 kb and contains 58 predicted protein-coding genes, including a novel signal-anchor-release (SAR) endolysin, a homolog of the T5 A1 protein required for DNA transfer, and a dual-start holin/antiholin pair. ...[more]

PMID: 33509996

Similar Datasets

Complete Genome Sequence of Rhizobium japonicum Podophage Pasto.

Project description:Rhizobium japonicum is a Gram-negative bacterium of interest for research into nitrogen fixation in legumes. This article describes the isolation, sequencing, and annotation of R. japonicum podophage Pasto. While it shows no significant similarity to identified phages, genomic analysis indicates that Pasto may be temperate and is a novel T7-like podophage.

| S-EPMC8407765 | biostudies-literature

Complete Genome Sequence of Lelliottia Podophage phD2B.

Project description:The genus Lelliottia was recently created from the group of environmental gammaproteobacteria previously included in the genus Enterobacter. Here, we report the complete genome sequence of phD2B, the first (according to our current knowledge) known phage that infects bacterium from the taxon.

| S-EPMC4246154 | biostudies-literature

Complete Genome Sequence of Escherichia coli Podophage Peacock.

Project description:Escherichia coli is typically a commensal bacterium of the mammalian intestinal tract. Here, the isolation and annotation of the 39,233-bp T7-like E. coli podophage Peacock genome are described.

| S-EPMC6763663 | biostudies-literature

Complete Genome Sequence of Stenotrophomonas maltophilia Podophage Ponderosa.

Project description:Stenotrophomonas maltophilia is a Gram-negative bacterium that is emerging as a multidrug-resistant global opportunistic pathogen. Here, we describe the genome of the T7-like S. maltophilia podophage Ponderosa, with 54 predicted protein-coding genes and a 493-bp terminal repeat.

| S-EPMC6763655 | biostudies-literature

Complete Genome Sequence of Klebsiella pneumoniae Podophage Pylas.

Project description:Carbapenemase-producing Klebsiella pneumoniae is an important opportunistic pathogen due to its drug resistance. This study reports on the isolation and characterization of a podophage, named Pylas, infecting this bacterium. The complete genome of phage Pylas is described, and it is distantly related to the well-studied phage N4.

| S-EPMC6856287 | biostudies-literature

Complete Genome Sequence of Klebsiella pneumoniae Podophage Patroon.

Project description:Klebsiella pneumoniae infection is a serious concern in hospital settings due to the continuing emergence of multidrug-resistant strains. The study of K. pneumoniae phages may help the development of new treatment strategies. Here, the complete genome sequence of K. pneumoniae phage Patroon, a T3/T7-like phage, is presented.

| S-EPMC6533387 | biostudies-literature

Complete Genome Sequence of Serratia marcescens Podophage Pila.

Project description:Multidrug-resistant Serratia marcescens strains cause serious nosocomial infections in humans. Here, we present the annotated genome sequence of S. marcescens podophage Pila. Similar to its closest relative, Enterobacteria phage T7, Pila has a 38,678-bp genome, predicted to encode 51 protein-coding genes, and contains 148-bp direct terminal repeats.

| S-EPMC6940308 | biostudies-literature

Complete Genome Sequence of Escherichia coli Podophage Penshu1.

Project description:Escherichia coli 4s is a Gram-negative bacterium found in the equine intestinal ecosystem alongside diverse other coliform bacteria and bacteriophages. This announcement describes the complete genome of the T7-like E. coli 4s podophage Penshu1. From its 39,263-bp genome, 54 protein-encoding genes and a 179-bp terminal repeat were predicted.

| S-EPMC6753287 | biostudies-literature

Complete Genome Sequence of Stenotrophomonas maltophilia Podophage Paxi.

Project description:Stenotrophomonas maltophilia is a multidrug-resistant nosocomial pathogen that can cause life-threatening infections among immunocompromised populations. This report presents the complete 74,962-bp genome of S. maltophilia podophage Paxi, an N4-like phage sharing 85.3% nucleotide similarity to S. maltophilia podophage Pokken.

| S-EPMC9022576 | biostudies-literature

Complete Genome Sequence of Caulobacter crescentus Podophage Percy.

Project description:Podophage Percy infects Caulobacter crescentus, a Gram-negative bacterium that divides asymmetrically and is a commonly used model organism to study the cell cycle, asymmetric cell division, and cell differentiation. Here, we announce the sequence and annotated complete genome of the phiKMV-like podophage Percy and note its prominent features.

| S-EPMC4661307 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data