Dataset Information

Minor allele of GJA1 gene polymorphism is associated with higher heart rate during atrial fibrillation.

ABSTRACT: Atrial fibrillation (AF) tachycardia causes heart failure and requires more attention. The genetic background of individual heart rate (HR) variations during AF are unclear. We hypothesized that HR-associated single nucleotide polymorphisms (SNPs) reported in Genome-Wide Association Studies (GWAS) are also associated with HR during AF. We enrolled patients with persistent AF (311 for screening and 146 for replication) who underwent AF ablation and were genotyped for the 21 h-associated SNPs reported in GWAS. The patients underwent 24-h Holter monitoring before AF ablation and electrophysiological study after AF ablation during sinus rhythm. Only the GJA1 SNP rs1015451 (T>C) was significantly associated with total HR (TT 110,643?±?17,542 beats/day, TC 116,350?±?19,060 beats/day, CC 122,163?±?25,684 beats/day, P?=?8.5?×?10^-4). We also confirmed this significant association in the replication set. The intra-atrial conduction was faster in AF patients with the GJA1 minor allele than in those without it. Multivariate analysis revealed the presence of a GJA1 SNP rs1015451 additive model, female gender, lower left ventricular ejection fraction, and higher 1:1 atrioventricular nodal conduction were independently associated with higher HR during AF. The GJA1 SNP might be a new genetic marker for AF tachycardia.

SUBMITTER: Okamura S

PROVIDER: S-EPMC7844413 | biostudies-literature | 2021 Jan

REPOSITORIES: biostudies-literature

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Minor allele of GJA1 gene polymorphism is associated with higher heart rate during atrial fibrillation.

Okamura Sho S Onohara Yuko Y Ochi Hidenori H Tokuyama Takehito T Hironobe Naoya N Okubo Yosaku Y Ikeuchi Yoshihiro Y Miyauchi Shunsuke S Chayama Kazuaki K Kihara Yasuki Y Nakano Yukiko Y

Scientific reports 20210128 1

Atrial fibrillation (AF) tachycardia causes heart failure and requires more attention. The genetic background of individual heart rate (HR) variations during AF are unclear. We hypothesized that HR-associated single nucleotide polymorphisms (SNPs) reported in Genome-Wide Association Studies (GWAS) are also associated with HR during AF. We enrolled patients with persistent AF (311 for screening and 146 for replication) who underwent AF ablation and were genotyped for the 21 h-associated SNPs repo ...[more]

PMID: 33510344

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Project description:BackgroundScreening the general public for atrial fibrillation (AF) may enable early detection and timely intervention, which could potentially decrease the incidence of stroke. Existing screening methods require professional monitoring and involve high costs. AF is characterized by an irregular irregularity of the cardiac rhythm, which may be detectable using an index quantifying and visualizing this type of irregularity, motivating wide screening programs and promoting the research of AF patient subgroups and clinical impact of AF burden.MethodsWe calculated variability, normality and mean of the difference between consecutive RR interval series (denoted as modified entropy scale-MESC) to quantify irregular irregularities. Based on the variability and normality indices calculated for long 1-lead ECG records, we created a plot termed a regularogram (RGG), which provides a visual presentation of irregularly irregular rates and their burden in a given record. To inspect the potency of these indices, they were applied to train and test a machine learning classifier to identify AF episodes in gold-standard, publicly available databases (PhysioNet) that include recordings from both patients with AF and/or other rhythm disturbances, and from healthy volunteers. The classifier was trained and validated on one database and tested on three other databases.ResultsIrregular irregularities were identified using normality, variability and mean MESC indices. The RGG displayed visually distinct differences between patients with vs. without AF and between patients with different levels of AF burden. Training a simple, explainable machine learning tool integrating these three indices enabled AF detection with 99.9% accuracy, when trained on the same person, and 97.8%, when trained on patients from a different database. Comparison to other RR interval-based AF detection methods that utilize signal processing, classic machine learning and deep learning techniques, showed superiority of our suggested method.ConclusionVisualizing and quantifying irregular irregularities will be of value for both rapid visual inspection of long Holter recordings for the presence and the burden of AF, and for machine learning classification to identify AF episodes. A free online tool for calculating the indices, drawing RGGs and estimating AF burden, is available.

Dataset Information

Minor allele of GJA1 gene polymorphism is associated with higher heart rate during atrial fibrillation.

Publications

Minor allele of GJA1 gene polymorphism is associated with higher heart rate during atrial fibrillation.

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