Browse
Submit Data
Databases
API
Help

Dataset Information

23 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Complete Genome Sequence of Curtobacterium sp. Strain YC1, Isolated from the Surface of Nostoc flagelliforme Colonies in Yinchuan, Ningxia, China.

ABSTRACT: The genus Curtobacterium belongs to the family Microbacteriaceae, within the phylum Actinobacteria. This genus includes a wide range of Gram-positive species associated with plants and soils. Here, we report the genome sequence of a new strain, Curtobacterium sp. strain YC1, which was isolated from the surface of Nostoc flagelliforme colonies. The genome of this strain contains one chromosome and one plasmid, and its size is 3.4 Mb.

SUBMITTER: Wei Y

PROVIDER: S-EPMC7953303 | biostudies-literature |

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Similar Datasets

Draft Genome Sequence of an Epiphytic Strain, <i>Bacillus</i> sp. Strain WL1, Isolated from the Surface of Nostoc flagelliforme Colonies in Yinchuan, Ningxia, China.

Project description:Bacillus species are Gram-positive, aerobic, spore-forming bacteria that are widely spread in soil, dust, and water. One strain, Bacillus sp. strain WL1, was isolated from the surface of the cyanobacterium Nostoc flagelliforme in Yinchuan, Ningxia, China. The draft genome sequence of this strain was 5.62 Mbp.

| S-EPMC8320452 | biostudies-literature

Complete Genome Sequence of Curtobacterium sp. Strain SGAir0471, Isolated from Singapore Air Samples.

Project description:Curtobacterium sp. strain SGAir0471 was isolated from tropical air samples collected in Singapore. The genome was assembled using PacBio RS II long reads and Illumina MiSeq short paired-end reads. The complete genome measures 3.53 Mb and consists of 3,151 protein-coding genes, 49 tRNAs, and 12 rRNAs.

| S-EPMC6872882 | biostudies-literature

Complete Genome Sequence of Curtobacterium sp. Strain MR_MD2014, Isolated from Topsoil in Woods Hole, Massachusetts.

Project description:Here, we present the 3,443,800-bp complete genome sequence of Curtobacterium sp. strain MR_MD2014 (phylum Actinobacteria). This strain was isolated from soil in Woods Hole, MA, as part of the 2014 Microbial Diversity Summer Program at the Marine Biological Laboratory in Woods Hole, MA.

| S-EPMC4698388 | biostudies-literature

Complete Genome Sequence of <i>Curtobacterium</i> sp. Strain TXMA1, Isolated from a Grapevine in Texas, USA.

Project description:The genome of Curtobacterium sp. strain TXMA1, isolated from a grapevine in Texas showing leaf marginal necrosis symptoms, was sequenced. The TXMA1 genome has a 3,454,876-bp, circular chromosome with a GC content of 71.74%, 3,213 open reading frames (ORFs), 47 tRNAs, and 4 complete rRNA operons (5S, 16S, and 23S).

| S-EPMC8759391 | biostudies-literature

Complete Genome Sequence of the Cryptophycin-Producing Cyanobacterium Nostoc sp. Strain ATCC 53789.

Project description:Nostoc sp. strain ATCC 53789 is a producer of cryptophycins, which are promising anticancer agents. Here, we report the completely sequenced 8.7-Mb genome of Nostoc sp. strain ATCC 53789. The sequence provides insights into the metabolic network of this cyanobacterial strain and illuminates its potential for the biosynthesis of secondary metabolites.

| S-EPMC7118181 | biostudies-literature

Nostoc flagelliforme

Project description:Nostoc flagelliforme Genome sequencing

| PRJNA315721 | ENA

High-Quality Draft Genome Sequence of Curtobacterium sp. Strain Ferrero.

Project description:Here, we present the high-quality draft genome sequence of Curtobacterium sp. strain Ferrero, an actinobacterium belonging to a novel species isolated as an environmental contaminant in a bacterial cell culture. The assembled genome of 3,694,888 bp in 49 contigs has a G+C content of 71.6% and contains 3,516 predicted genes.

| S-EPMC5722072 | biostudies-other

Complete genome sequence of the biofilm-forming Curtobacterium sp. strain BH-2-1-1, isolated from lettuce (Lactuca sativa) originating from a conventional field in Norway.

Project description:Here, we present the 3,795,952 bp complete genome sequence of the biofilm-forming Curtobacterium sp. strain BH-2-1-1, isolated from conventionally grown lettuce (Lactuca sativa) from a field in Vestfold, Norway. The nucleotide sequence of this genome was deposited into NCBI GenBank under the accession CP017580.

| S-EPMC5107678 | biostudies-literature

Profiling of Small Molecular Metabolites in Nostoc flagelliforme during Periodic Desiccation.

Project description:The mass spectrometry-based metabolomics approach has become a powerful tool for the quantitative analysis of small-molecule metabolites in biological samples. Nostoc flagelliforme, an edible cyanobacterium with herbal value, serves as an unexploited bioresource for small molecules. In natural environments, N. flagelliforme undergoes repeated cycles of rehydration and dehydration, which are interrupted by either long- or short-term dormancy. In this study, we performed an untargeted metabolite profiling of N. flagelliforme samples at three physiological states: Dormant (S1), physiologically fully recovered after rehydration (S2), and physiologically partially inhibited following dehydration (S3). Significant metabolome differences were identified based on the OPLS-DA (orthogonal projections to latent structures discriminant analysis) model. In total, 183 differential metabolites (95 up-regulated; 88 down-regulated) were found during the rehydration process (S2 vs. S1), and 130 (seven up-regulated; 123 down-regulated) during the dehydration process (S3 vs. S2). Thus, it seemed that the metabolites' biosynthesis mainly took place in the rehydration process while the degradation or possible conversion occurred in the dehydration process. In addition, lipid profile differences were particularly prominent, implying profound membrane phase changes during the rehydration-dehydration cycle. In general, this study expands our understanding of the metabolite dynamics in N. flagelliforme and provides biotechnological clues for achieving the efficient production of those metabolites with medical potential.

| S-EPMC6562405 | biostudies-literature

Nostoc flagelliforme CCNUN1

Project description:Nostoc flagelliforme CCNUN1 Genome sequencing and assembly

| PRJNA407846 | ENA