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Cytoplasmic synthesis of endogenous Alu complementary DNA via reverse transcription and implications in age-related macular degeneration.


ABSTRACT: Alu retroelements propagate via retrotransposition by hijacking long interspersed nuclear element-1 (L1) reverse transcriptase (RT) and endonuclease activities. Reverse transcription of Alu RNA into complementary DNA (cDNA) is presumed to occur exclusively in the nucleus at the genomic integration site. Whether Alu cDNA is synthesized independently of genomic integration is unknown. Alu RNA promotes retinal pigmented epithelium (RPE) death in geographic atrophy, an untreatable type of age-related macular degeneration. We report that Alu RNA-induced RPE degeneration is mediated via cytoplasmic L1-reverse-transcribed Alu cDNA independently of retrotransposition. Alu RNA did not induce cDNA production or RPE degeneration in L1-inhibited animals or human cells. Alu reverse transcription can be initiated in the cytoplasm via self-priming of Alu RNA. In four health insurance databases, use of nucleoside RT inhibitors was associated with reduced risk of developing atrophic macular degeneration (pooled adjusted hazard ratio, 0.616; 95% confidence interval, 0.493-0.770), thus identifying inhibitors of this Alu replication cycle shunt as potential therapies for a major cause of blindness.

SUBMITTER: Fukuda S 

PROVIDER: S-EPMC8017980 | biostudies-literature | 2021 Feb

REPOSITORIES: biostudies-literature

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Cytoplasmic synthesis of endogenous <i>Alu</i> complementary DNA via reverse transcription and implications in age-related macular degeneration.

Fukuda Shinichi S   Varshney Akhil A   Fowler Benjamin J BJ   Wang Shao-Bin SB   Narendran Siddharth S   Ambati Kameshwari K   Yasuma Tetsuhiro T   Magagnoli Joseph J   Leung Hannah H   Hirahara Shuichiro S   Nagasaka Yosuke Y   Yasuma Reo R   Apicella Ivana I   Pereira Felipe F   Makin Ryan D RD   Magner Eamonn E   Liu Xinan X   Sun Jian J   Wang Mo M   Baker Kirstie K   Marion Kenneth M KM   Huang Xiwen X   Baghdasaryan Elmira E   Ambati Meenakshi M   Ambati Vidya L VL   Pandey Akshat A   Pandya Lekha L   Cummings Tammy T   Banerjee Daipayan D   Huang Peirong P   Yerramothu Praveen P   Tolstonog Genrich V GV   Held Ulrike U   Erwin Jennifer A JA   Paquola Apua C M ACM   Herdy Joseph R JR   Ogura Yuichiro Y   Terasaki Hiroko H   Oshika Tetsuro T   Darwish Shaban S   Singh Ramendra K RK   Mozaffari Saghar S   Bhattarai Deepak D   Kim Kyung Bo KB   Hardin James W JW   Bennett Charles L CL   Hinton David R DR   Hanson Timothy E TE   Röver Christian C   Parang Keykavous K   Kerur Nagaraj N   Liu Jinze J   Werner Brian C BC   Sutton S Scott SS   Sadda Srinivas R SR   Schumann Gerald G GG   Gelfand Bradley D BD   Gage Fred H FH   Ambati Jayakrishna J  

Proceedings of the National Academy of Sciences of the United States of America 20210201 6


<i>Alu</i> retroelements propagate via retrotransposition by hijacking long interspersed nuclear element-1 (L1) reverse transcriptase (RT) and endonuclease activities. Reverse transcription of <i>Alu</i> RNA into complementary DNA (cDNA) is presumed to occur exclusively in the nucleus at the genomic integration site. Whether <i>Alu</i> cDNA is synthesized independently of genomic integration is unknown. <i>Alu</i> RNA promotes retinal pigmented epithelium (RPE) death in geographic atrophy, an un  ...[more]

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