Toxoplasma gondii virulence prediction using hierarchical cluster analysis based on coding sequences (CDS) of sag1, gra7 and rop18.
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ABSTRACT:
SUBMITTER: Subekti DT
PROVIDER: S-EPMC8636655 | biostudies-literature | 2021 Nov
REPOSITORIES: biostudies-literature
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<i>Toxoplasma gondii</i> virulence prediction using hierarchical cluster analysis based on coding sequences (CDS) of <i>sag1</i>, <i>gra7</i> and <i>rop18</i>.
Subekti Didik T DT Ekawasti Fitrine F Desem Muhammad Ibrahim MI Azmi Zul Z
Journal of veterinary science 20211101 6
<i>Toxoplasma gondii</i> consists of three genotypes, namely genotype I, II and III. Based on its virulence, <i>T. gondii</i> can be divided into virulent and avirulent strains. This study intends to evaluate an alternative method for predicting <i>T. gondii</i> virulence using hierarchical cluster analysis based on complete coding sequences (CDS) of <i>sag1</i>, <i>gra7</i> and <i>rop18</i> genes. Dendrogram was constructed using UPGMA with a Kimura 80 nucleotide distance measurement. The resul ...[more]
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