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Representation of molecules for drug response prediction.

ABSTRACT: The rapid development of machine learning and deep learning algorithms in the recent decade has spurred an outburst of their applications in many research fields. In the chemistry domain, machine learning has been widely used to aid in drug screening, drug toxicity prediction, quantitative structure-activity relationship prediction, anti-cancer synergy score prediction, etc. This review is dedicated to the application of machine learning in drug response prediction. Specifically, we focus on molecular representations, which is a crucial element to the success of drug response prediction and other chemistry-related prediction tasks. We introduce three types of commonly used molecular representation methods, together with their implementation and application examples. This review will serve as a brief introduction of the broad field of molecular representations.

SUBMITTER: An X

PROVIDER: S-EPMC8769696 | biostudies-literature | 2022 Jan

REPOSITORIES: biostudies-literature

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Representation of molecules for drug response prediction.

An Xin X Chen Xi X Yi Daiyao D Li Hongyang H Guan Yuanfang Y

Briefings in bioinformatics 20220101 1

The rapid development of machine learning and deep learning algorithms in the recent decade has spurred an outburst of their applications in many research fields. In the chemistry domain, machine learning has been widely used to aid in drug screening, drug toxicity prediction, quantitative structure-activity relationship prediction, anti-cancer synergy score prediction, etc. This review is dedicated to the application of machine learning in drug response prediction. Specifically, we focus on mol ...[more]

PMID: 34571534

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