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Global characterization of macrophage polarization mechanisms and identification of M2-type polarization inhibitors.


ABSTRACT: Macrophages undergoing M1- versus M2-type polarization differ significantly in their cell metabolism and cellular functions. Here, global quantitative time-course proteomics and phosphoproteomics paired with transcriptomics provide a comprehensive characterization of temporal changes in cell metabolism, cellular functions, and signaling pathways that occur during the induction phase of M1- versus M2-type polarization. Significant differences in, especially, metabolic pathways are observed, including changes in glucose metabolism, glycosaminoglycan metabolism, and retinoic acid signaling. Kinase-enrichment analysis shows activation patterns of specific kinases that are distinct in M1- versus M2-type polarization. M2-type polarization inhibitor drug screens identify drugs that selectively block M2- but not M1-type polarization, including mitogen-activated protein kinase kinase (MEK) and histone deacetylase (HDAC) inhibitors. These datasets provide a comprehensive resource to identify specific signaling and metabolic pathways that are critical for macrophage polarization. In a proof-of-principle approach, we use these datasets to show that MEK signaling is required for M2-type polarization by promoting peroxisome proliferator-activated receptor-γ (PPARγ)-induced retinoic acid signaling.

SUBMITTER: He L 

PROVIDER: S-EPMC8783961 | biostudies-literature | 2021 Nov

REPOSITORIES: biostudies-literature

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Global characterization of macrophage polarization mechanisms and identification of M2-type polarization inhibitors.

He Lizhi L   Jhong Jhih-Hua JH   Chen Qi Q   Huang Kai-Yao KY   Strittmatter Karin K   Kreuzer Johannes J   DeRan Michael M   Wu Xu X   Lee Tzong-Yi TY   Slavov Nikolai N   Haas Wilhelm W   Marneros Alexander G AG  

Cell reports 20211101 5


Macrophages undergoing M1- versus M2-type polarization differ significantly in their cell metabolism and cellular functions. Here, global quantitative time-course proteomics and phosphoproteomics paired with transcriptomics provide a comprehensive characterization of temporal changes in cell metabolism, cellular functions, and signaling pathways that occur during the induction phase of M1- versus M2-type polarization. Significant differences in, especially, metabolic pathways are observed, inclu  ...[more]

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