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Estimating HLA haplotype frequencies from homozygous individuals - A Technical Report.


ABSTRACT: We estimated HLA haplotype frequencies based on individuals homozygous for 4, 5 or 6 loci. Validation of our approach using a sample of over 3.4 million German individuals was successful. Compared to an expectation-maximization algorithm, the errors were larger. However, our approach allows the unequivocal detection of rare haplotypes.

SUBMITTER: Seitz S 

PROVIDER: S-EPMC9131737 | biostudies-literature | 2021 Dec

REPOSITORIES: biostudies-literature

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Estimating HLA haplotype frequencies from homozygous individuals - A Technical Report.

Seitz Susanne S   Lange Vinzenz V   Norman Paul J PJ   Sauter Jürgen J   Schmidt Alexander H AH  

International journal of immunogenetics 20210927 6


We estimated HLA haplotype frequencies based on individuals homozygous for 4, 5 or 6 loci. Validation of our approach using a sample of over 3.4 million German individuals was successful. Compared to an expectation-maximization algorithm, the errors were larger. However, our approach allows the unequivocal detection of rare haplotypes. ...[more]

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