InterCellDB: A User-Defined Database for Inferring Intercellular Networks.
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ABSTRACT:
SUBMITTER: Jin Z
PROVIDER: S-EPMC9353444 | biostudies-literature | 2022 Aug
REPOSITORIES: biostudies-literature
Publications
InterCellDB: A User-Defined Database for Inferring Intercellular Networks.
Jin Ziyang Z Zhang Xiaotao X Dai Xuejiao X Huang Jinyan J Hu Xiaoming X Zhang Jianmin J Shi Ligen L
Advanced science (Weinheim, Baden-Wurttemberg, Germany) 20220602 22
Recent advances in single cell RNA sequencing (scRNA-seq) empower insights into cell-cell crosstalk within specific tissues. However, customizable data analysis tools that decipher intercellular communication from gene expression in association with biological functions are lacking. The authors have developed InterCellDB, a platform that allows a user-defined analysis of intercellular communication using scRNA-seq datasets in combination with protein annotation information, including cellular lo ...[more]
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