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Synthesis, optical and electrochemical properties of (D-π)₂-type and (D-π)₂Ph-type fluorescent dyes.

ABSTRACT: The (D-π)₂-type fluorescent dye OTT-2 with two (diphenylamino)carbazole-thiophene units as D (electron-donating group)-π (π-conjugated bridge) moiety and the (D-π)₂Ph-type fluorescent dye OTK-2 with the two D-π moieties connected through a phenyl ring were derived by oxidative homocoupling of a stannyl D-π unit and Stille coupling of a stannyl D-π unit with 1,3-diiodobenzene, respectively. Their optical and electrochemical properties were investigated by photoabsorption and fluorescence spectroscopy, time-resolved fluorescence spectroscopy, cyclic voltammetry (CV) and molecular orbital (MO) calculations. In toluene the photoabsorption and fluorescence maximum wavelengths (λ_max,abs and λ_max,fl) of OTT-2 appear in a longer wavelength region than those of OTK-2. The fluorescence quantum yield (Φ_fl) of OTT-2 is 0.41, which is higher than that (Φ_fl = 0.36) of OTK-2. In the solid state OTT-2 shows relatively intense fluorescence properties (Φ_fl-solid = 0.24 nm), compared with OTK-2 (Φ_fl-solid = 0.15 nm). CV results demonstrated that OTT-2 and OTK-2 exhibit a reversible oxidation wave. Based on photoabsorption, fluorescence spectroscopy and CV for the two dyes, it was found that the lowest unoccupied molecular orbital (LUMO) energy level of OTT-2 is lower than that of OTK-2, but OTT-2 and OTK-2 have comparable highest occupied molecular orbital (HOMO) energy levels. Consequently, this work reveals that compared to the (D-π)₂Ph-type structure, the (D-π)₂-type structure exhibits not only a bathochromic shift of the photoabsorption band, but also intense fluorescence emission both in solution and the solid state.

SUBMITTER: Takemura K

PROVIDER: S-EPMC9443425 | biostudies-literature | 2022

REPOSITORIES: biostudies-literature

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Synthesis, optical and electrochemical properties of (D-π)2-type and (D-π)2Ph-type fluorescent dyes.

Takemura Kosuke K Ohira Kazuki K Higashino Taiki T Imato Keiichi K Ooyama Yousuke Y

Beilstein journal of organic chemistry 20220818

The (D-π)2-type fluorescent dye OTT-2 with two (diphenylamino)carbazole-thiophene units as D (electron-donating group)-π (π-conjugated bridge) moiety and the (D-π)2Ph-type fluorescent dye OTK-2 with the two D-π moieties connected through a phenyl ring were derived by oxidative homocoupling of a stannyl D-π unit and Stille coupling of a stannyl D-π unit with 1,3-diiodobenzene, respectively. Their optical and electrochemical properties were investigated by photo ...[more]

PMID: 36105734

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Project description:The donor-acceptor-π-conjugated (D-π-)2A fluorescent dyes OUY-2, OUK-2 and OUJ-2 with two (diphenylamino)carbazole thiophene units as D (electron-donating group)-π (π-conjugated bridge) moiety and a pyridine, pyrazine or triazine ring as electron-withdrawing group (electron-accepting group, A) have been designed and synthesized. The photophysical and electrochemical properties of the three dyes were investigated by photoabsorption and fluorescence spectroscopy, Lippert-Mataga plots, cyclic voltammetry and density functional theory calculations. The photoabsorption maximum (λmax,abs) and the fluorescence maximum (λmax,fl) for the intramolecular charge-transfer characteristic band of the (D-π-)2A fluorescent dyes show bathochromic shifts in the order of OUY-2 < OUK-2 < OUJ-2. Moreover, the photoabsorption bands of the (D-π-)2A fluorescent dyes are nearly independent of solvent polarity, while the fluorescence bands showed bathochromic shifts with increasing solvent polarity (i.e., positive fluorescence solvatochromism). The Lippert-Mataga plots for OUY-2, OUK-2 and OUJ-2 indicate that the Δμ (= μe - μg) value, which is the difference in the dipole moment of the dye between the excited (μe) and the ground (μg) states, increases in the order of OUY-2 < OUK-2 < OUJ-2. Therefore, the fact explains our findings that OUJ-2 shows large bathochromic shifts of the fluorescence maxima in polar solvents, as well as the Stokes shift values of OUJ-2 in polar solvents are much larger than those in nonpolar solvents. The cyclic voltammetry of OUY-2, OUK-2 and OUJ-2 demonstrated that there is little difference in the HOMO energy level among the three dyes, but the LUMO energy levels decrease in the order of OUY-2 > OUK-2 > OUJ-2. Consequently, this work reveals that for the (D-π-)2A fluorescent dyes OUY-2, OUK-2 and OUJ-2 the bathochromic shifts of λmax,abs and λmax,fl and the lowering of the LUMO energy level are dependent on the electron-withdrawing ability of the azine ring, which increases in the order of OUY-2 < OUK-2 < OUJ-2.

Project description:Bathochromic or hypsochromic shift-type mechanofluorochromism (b-MFC or h-MFC) was found for (D-π-)2A-type azine-based fluorescent dyes OUY-2, OUK-2, and OUJ-2 possessing intramolecular charge-transfer (ICT) characteristics from two (diphenylamino)carbazole-thiophene units as D (electron-donating group)-π (π-conjugated bridge) moieties to a pyridine, pyrazine, or triazine ring as A (electron-withdrawing group): grinding of the recrystallized dyes induced red or blue shifts of the fluorescent colors, that is, bathochromic or hypsochromic shifts of the fluorescence maximum wavelengths (λfl-solid max). The degrees of MFC evaluated by the absolute value of differences (Δλ fl-solid max) in λfl-solid max before and after grinding of the recrystallized dyes increased in the order of OUY-2 (+7 nm) < OUK-2 (-17 nm) < OUJ-2 (+45 nm), so that OUJ-2 exhibits obvious b-MFC, but OUK-2 exhibits h-MFC. X-ray powder diffraction (XRD) and differential scanning calorimetry (DSC) demonstrated that the recrystallized dyes were in the crystalline state but the ground dyes were in the amorphous state. When the ground solids were heated above their crystallization temperatures (T c), the colors and fluorescent colors recovered to the original ones before grinding or converted to other ones, that is, heating the ground solids in the amorphous state induced the recrystallization to recover the original microcrystals or to form other microcrystals due to polymorph transformation. However, (D-π-)2Ph-type fluorescent dye OTK-2 having a phenyl group as a substitute for the azine rings exhibited non-obvious MFC. Molecular orbital (MO) calculations indicated that the values of the dipole moments (μ g) in the ground state were 4.0 debye, 1.4 debye, 3.2 debye, and 2.9 debye for OTK-2, OUY-2, OUK-2, and OUJ-2, respectively. Consequently, on the basis of experimental results and MO calculations, we have demonstrated that the MFC of the (D-π-)2A-type azine-based fluorescent dyes is attributed to reversible switching between the crystalline state of the recrystallized dyes and the amorphous state of the ground dyes with changes in the intermolecular dipole-dipole and π-π interactions before and after grinding. Moreover, this work reveals that (D-π-)2A fluorescent dyes possessing dipole moments of ca. 3 debye as well as moderate or intense ICT characteristics make it possible to activate the MFC.

Project description:A recently engineered mutant of cyan fluorescent protein (WasCFP) that exhibits pH-dependent absorption suggests that its tryptophan-based chromophore switches between neutral (protonated) and charged (deprotonated) states depending on external pH. At pH 8.1, the latter gives rise to green fluorescence as opposed to the cyan color of emission that is characteristic for the neutral form at low pH. Given the high energy cost of deprotonating the tryptophan at the indole nitrogen, this behavior is puzzling, even if the stabilizing effect of the V61K mutation in proximity to the protonation/deprotonation site is considered. Because of its potential to open new avenues for the development of optical sensors and photoconvertible fluorescent proteins, a mechanistic understanding of how the charged state in WasCFP can possibly be stabilized is thus important. Attributed to the dynamic nature of proteins, such understanding often requires knowledge of the various conformations adopted, including transiently populated conformational states. Transient conformational states triggered by pH are of emerging interest and have been shown to be important whenever ionizable groups interact with hydrophobic environments. Using a combination of the weighted-ensemble sampling method and explicit-solvent constant pH molecular dynamics (CPHMD(MS?D)) simulations, we have identified a solvated transient state, characterized by a partially open ?-barrel where the chromophore pKa of 6.8 is shifted by over 20 units from that of the closed form (6.8 and 31.7, respectively). This state contributes a small population at low pH (12% at pH 6.1) but becomes dominant at mildly basic conditions, contributing as much as 53% at pH 8.1. This pH-dependent population shift between neutral (at pH 6.1) and charged (at pH 8.1) forms is thus responsible for the observed absorption behavior of WasCFP. Our findings demonstrate the conditions necessary to stabilize the charged state of the WasCFP chromophore (namely, local solvation at the deprotonation site and a partial flexibility of the protein ?-barrel structure) and provide the first evidence that transient conformational states can control optical properties of fluorescent proteins.

Project description:Chemically synthesized near-infrared aza-BODIPY dyes displayed off-on fluorescence at acidic pH (pKa = 6.2-6.6) through the suppression of the photoinduced electron transfer and/or internal charge transfer process. The apparent pKas of the dyes were shifted well above physiological pH in a hydrophobic microenvironment, which led to "turned-on" fluorescence in micelles and liposomes at neutral and basic pH. Bovine serum albumin also activated the fluorescence, though to a much lesser extent. When these small molecular dyes entered cells, instead of being fluorescent only in acidic organelles, the whole cytoplasm exhibited fluorescence, with a signal/background ratio as high as ?10 in no-wash live-cell imaging. The dye 1-labeled cells remained highly fluorescent even after 3 days. Moreover, slight variations of the dye structure resulted in significantly different intracellular fluorescence behaviors, possibly because of their different cellular uptake and intracellular activation capabilities. After the separation of cellular components, the fraction of plasma membrane and endoplasmic reticulum showed the highest fluorescence, further confirming the fluorescence activation by membrane structures. The fluorescence intensity of these dyes at different intracellular pHs (6.80 and 8.00) did not differ significantly, indicating that intracellular pH did not play a critical role. Altogether, we showed here for the first time that the fluorescence of pH-sensitive aza-BODIPY dyes was switched intracellularly not by acidic pH, but by intracellular membranes (and proteins as well). The excellent membrane permeability, ultrahigh fluorescence contrast ratio, persistent fluorescent signal, and minimal biological interference of dye 1 make it an ideal choice for live-cell imaging and in vivo cell tracking. These findings also imply that the intracellular fluorescence properties of pH-sensitive dyes should be carefully examined before they are used as pH indicators.

Dataset Information

Synthesis, optical and electrochemical properties of (D-π)₂-type and (D-π)₂Ph-type fluorescent dyes.

Publications

Synthesis, optical and electrochemical properties of (D-π)<sub>2</sub>-type and (D-π)<sub>2</sub>Ph-type fluorescent dyes.

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