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Metabolic fluorine labeling and hotspot imaging of dynamic gut microbiota in mice.


ABSTRACT: Real-time localization and microbial activity information of indigenous gut microbiota over an extended period of time remains a challenge with existing visualizing methods. Here, we report a metabolic fluorine labeling (MEFLA)-based strategy for monitoring the dynamic gut microbiota via 19F magnetic resonance imaging (19F MRI). In situ labeling of different microbiota subgroups is achieved by using a panel of peptidoglycan-targeting MEFLA probes containing 19F atoms of different chemical shifts, and subsequent real-time in vivo imaging is accomplished by multiplexed hotspot 19F MRI with high sensitivity and unlimited penetration. Using this method, we realize extended visualization (>24 hours) of native gut microbes located at different intestinal sections and semiquantitative analysis of their metabolic dynamics modulated by various conditions, such as the host death and different β-lactam antibiotics. Our strategy holds great potential for noninvasive and real-time assessing of the metabolic activities and locations of the highly dynamic gut microbiota.

SUBMITTER: Chen D 

PROVIDER: S-EPMC9882976 | biostudies-literature | 2023 Jan

REPOSITORIES: biostudies-literature

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Metabolic fluorine labeling and hotspot imaging of dynamic gut microbiota in mice.

Chen Dongxia D   Guo Junnan J   Li Ao A   Sun Chengjie C   Lin Huibin H   Lin Hongyu H   Yang Chaoyong C   Wang Wei W   Gao Jinhao J  

Science advances 20230127 4


Real-time localization and microbial activity information of indigenous gut microbiota over an extended period of time remains a challenge with existing visualizing methods. Here, we report a metabolic fluorine labeling (MEFLA)-based strategy for monitoring the dynamic gut microbiota via <sup>19</sup>F magnetic resonance imaging (<sup>19</sup>F MRI). In situ labeling of different microbiota subgroups is achieved by using a panel of peptidoglycan-targeting MEFLA probes containing <sup>19</sup>F a  ...[more]

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