Genomics

Dataset Information

0

HELIC_MANOLIS_OmniExpress - samples


ABSTRACT: Samples from the Greek island of Crete, MANOLIS cohort

PROVIDER: EGAD00010000522 | EGA |

REPOSITORIES: EGA

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Publications

Genetic characterization of Greek population isolates reveals strong genetic drift at missense and trait-associated variants.

Panoutsopoulou Kalliope K   Hatzikotoulas Konstantinos K   Xifara Dionysia Kiara DK   Colonna Vincenza V   Farmaki Aliki-Eleni AE   Ritchie Graham R S GR   Southam Lorraine L   Gilly Arthur A   Tachmazidou Ioanna I   Fatumo Segun S   Matchan Angela A   Rayner Nigel W NW   Ntalla Ioanna I   Mezzavilla Massimo M   Chen Yuan Y   Kiagiadaki Chrysoula C   Zengini Eleni E   Mamakou Vasiliki V   Athanasiadis Antonis A   Giannakopoulou Margarita M   Kariakli Vassiliki-Eirini VE   Nsubuga Rebecca N RN   Karabarinde Alex A   Sandhu Manjinder M   McVean Gil G   Tyler-Smith Chris C   Tsafantakis Emmanouil E   Karaleftheri Maria M   Xue Yali Y   Dedoussis George G   Zeggini Eleftheria E  

Nature communications 20141106


Isolated populations are emerging as a powerful study design in the search for low-frequency and rare variant associations with complex phenotypes. Here we genotype 2,296 samples from two isolated Greek populations, the Pomak villages (HELIC-Pomak) in the North of Greece and the Mylopotamos villages (HELIC-MANOLIS) in Crete. We compare their genomic characteristics to the general Greek population and establish them as genetic isolates. In the MANOLIS cohort, we observe an enrichment of missense  ...[more]

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